DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and cyp27c1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001011341.1 Gene:cyp27c1 / 496805 XenbaseID:XB-GENE-6257635 Length:469 Species:Xenopus tropicalis


Alignment Length:485 Identity:131/485 - (27%)
Similarity:243/485 - (50%) Gaps:64/485 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LMEMFEAMRQDYGDIF---FMPGIMGNPPFLSTHNPQDFEV-VFRNEGVWPNRPGNYTLLYHREE 134
            :.|:.:...:.||.||   |      .|.|:.:...:|... |.|.|...|.|....:  :|  |
 Frog    22 IQEIQQKHARQYGRIFKSHF------GPQFVVSIADKDMVAQVLRAERDAPQRANMES--WH--E 76

  Fly   135 YRKDFYQG-VMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELR--DPD 196
            ||:  .:| ..|:|..:|:.|.:.|:|:...:::|::|.:|...:::|.::.|:||.:||  :.|
 Frog    77 YRE--LRGRSTGLISAEGEKWLNMRSVLRQKILRPRDVAMYSGGVNEVVEDLVKRIRKLRVQESD 139

  Fly   197 TLEAPDDFIDTIN----RWTLESVSVVALDKQLGLL-----KNSNKESEALKLFH--YLDEFFIV 250
            .|.     :..:|    ::::|:::.:..:.:||.|     :.:.:..|||:|..  :....:..
 Frog   140 GLT-----VTNVNDLYFKYSMEAIATILYECRLGCLDDQIPQQTKEYIEALELMFSMFKTTMYAG 199

  Fly   251 SIDLEMK---PSPWRYIKTPKLKRLMRALDGIQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVL 312
            :|...::   |.|||        ...|:.||:.:.:..:||:.:.:::.:.::|   .|.:..||
 Frog   200 AIPKWLRPLIPKPWR--------EFCRSWDGLFKFSQIHVDDRLRQIESQLEKG---EEVQGGVL 253

  Fly   313 EKLL---KVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEF 374
            ..||   ::|.:.......:||:|||||||.|.:.....|||||..|..:.:::::.. .|:...
 Frog   254 THLLLSKELDLEEIYANMTEMLLAGVDTTSFTLSWATYLLAKNPGIQEAVYQQIVQNF-GKDQVP 317

  Fly   375 TEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYVNIVPLNALTRDEYFPQ 439
            |...:..:|.:||.:||:.||.|::.||.||...|.|:.||.:|.||.:.:...:.....|.||.
 Frog   318 TAEDVPKMPLVRAVVKETLRLFPVLPGNGRVTQDDLVVGGYFIPKGTQLALCHYSTSYDAECFPA 382

  Fly   440 ASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFN 504
            |.||.||||:||          ..|:....|..:|||:|.|.|:|:|:.|:|:.|...:|::||.
 Frog   383 AEEFRPERWIRS----------GNLERKENFGSIPFGYGIRSCIGRRVAELEMHLLLIQLLQNFE 437

  Fly   505 VEFNYPTENAF-RSALINLPNIPLKFKFID 533
            ::.:..|.... ::..:..|...:..:|:|
 Frog   438 IKPSPQTTTVLPKTHGLLCPGGKINVRFVD 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 129/481 (27%)
cyp27c1NP_001011341.1 p450 2..457 CDD:306555 128/473 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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