DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and cyp27b1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001006907.1 Gene:cyp27b1 / 448754 XenbaseID:XB-GENE-942527 Length:506 Species:Xenopus tropicalis


Alignment Length:455 Identity:125/455 - (27%)
Similarity:219/455 - (48%) Gaps:61/455 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PFLSTH--NPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQG-VMGVIPTQGKPWGDFRTV 160
            |.|:.|  .|...|.|.|.||..|.|..    |...::||:  .:| ..|::..:|:.|..||::
 Frog    86 PILTVHVAEPSLIEQVLRQEGKHPIRSD----LSSWKDYRQ--CRGHSYGLLTAEGEEWQQFRSI 144

  Fly   161 VNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQL 225
            :...:::||.|..|...::.|..:.:::|...|..:......|.......:.||.:|.|..:.::
 Frog   145 LGKHMLKPKEVEAYSDVLNDVVGDLIKKINYQRSQNQNNVVKDIAKEFYMFGLEGISSVLFESRI 209

  Fly   226 GLLKNS-NKESEALKLFHYLDEFFIVSIDLEMKP--------SPWRYIKTPKLKRLMRALDGIQE 281
            |.|:.: .||:|  |....::..|::::.....|        .||        ::...:.|.:..
 Frog   210 GCLEPTVPKETE--KFIQSINTMFVMTLLTMAMPKFLHKIFRKPW--------QKFCESWDYMFA 264

  Fly   282 VTLAYVDEAIERLDKEAKEGVVRPENEQSVLEKLL-------KVDRKVATVMAMDMLMAGVDTTS 339
            ....::|:.::.:.::..:|       :.|..|.|       |:..|.......::|:|||||.|
 Frog   265 FAKGHIDKRMKDVAQKLAQG-------EKVEGKYLTYYLAQEKIPMKSIYGNVTELLLAGVDTIS 322

  Fly   340 STFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNAR 404
            ||.:..|..||::|:.|:.:..||.::|..|... :.:.:..:|.|:|.:||..||:|:|.||||
 Frog   323 STLSWSLYELAQHPDIQSAVYSEVEEILQGKQIP-SPSDVARMPLLKAVVKEVLRLYPVIPGNAR 386

  Fly   405 VLA-RDAVLSGYRVPAGTYVNIVPLNALTRDE-YFPQASEFLPERWLRSPKDSESKCPANELKST 467
            |:| ||..:..|.:|..|.:.:... |.:||| .|...:||.|:|||:. :|:.           
 Frog   387 VVADRDIQVGDYIIPKKTLITLCHY-ATSRDENVFSNPNEFQPDRWLKK-EDTH----------- 438

  Fly   468 NPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAF---RSALINLPNIPLKF 529
            :|:..||||||.|.|:|:||.|:|:.|..||::.:|.|:...|.....   |:.|:....|.|:|
 Frog   439 HPYASLPFGFGKRSCIGRRIAELEVYLALARILSHFEVKPEQPGSLVMPMTRTLLVPEKEINLQF 503

  Fly   530  529
             Frog   504  503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 125/455 (27%)
cyp27b1NP_001006907.1 p450 45..503 CDD:365848 124/453 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.980

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