DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp6a18

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001287562.1 Gene:Cyp6a18 / 43304 FlyBaseID:FBgn0039519 Length:507 Species:Drosophila melanogaster


Alignment Length:381 Identity:109/381 - (28%)
Similarity:175/381 - (45%) Gaps:62/381 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFV---------QRILELRDPDTLEAPDDFID 206
            |..|...|:.::......| ::..|..:..|.:||:         ..||::|            |
  Fly   126 GPQWRLLRSKLSSTFTSGK-MKFMYPTVVSVAEEFMAVMHEKVSENSILDVR------------D 177

  Fly   207 TINRWTLESVSVVALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKR 271
            .:.|:|::.:...|    .|:..||.::.:| :..|:.....:.|....:.....|  ..|.|.|
  Fly   178 LVARFTVDVIGTCA----FGIKCNSLRDEKA-EFLHFGRRALLDSRHGNLVSGLMR--SYPNLAR 235

  Fly   272 ---LMRALDGIQEVTLAYVDEAIERLDKEAKE---------GVVRPEN---EQSVLEKLLKVDRK 321
               |.|....|||.....|.|.:...:||..:         |:...:|   |...:.|.|.:|..
  Fly   236 RLGLCRNTAQIQEFYQRIVKETVTLREKENIKRNDFMDMLIGLKNQKNMTLENGEVVKGLTMDEI 300

  Fly   322 VATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLR 386
            ||  .|....:||.||:|||....|..|||||..|.::|.|:.:||...:.:||...:|::.||.
  Fly   301 VA--QAFVFFIAGFDTSSSTMGFALYELAKNPSIQDKVRAELGQVLEQHDQKFTYECIKDLKYLD 363

  Fly   387 ACIKESQRLHPLIVGNARVLARDAVLSG---YRVPAGTYVNIVPLNALTRD-EYFPQASEFLPER 447
            ..|.|:.|.:.::....||.|:..|:.|   :.:.||..| |:|.:|:..| ..:|:.:||.|||
  Fly   364 QVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSV-IIPSSAIHHDPSIYPEPNEFRPER 427

  Fly   448 WLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNF 503
            :  ||::| :|.|:        ..:||||.|||.|:|.|..:|:..:|.|.||:||
  Fly   428 F--SPEES-AKRPS--------VAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNF 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 109/381 (29%)
Cyp6a18NP_001287562.1 p450 38..504 CDD:278495 109/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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