DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and Cyp313a4

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster


Alignment Length:528 Identity:112/528 - (21%)
Similarity:209/528 - (39%) Gaps:114/528 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RLNMWALSMKMSMPGG---------KYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQ 107
            |...:.|::|:..|.|         ..:..:::..|......:|...|  ..:|..||:...:||
  Fly    22 RRRFYLLTLKIPGPLGYPILGMAHWLMRREDILNAFGCFLDKHGPTIF--SWLGPIPFMIVSDPQ 84

  Fly   108 DFEVVFR-----NEGVWPNRPGNYTLLYHREEYRKDFYQGV-----MGVIPTQGKPWGDFRTVVN 162
            ..:.:|.     |:|:                    .|:.|     :|:...:...|...|.::|
  Fly    85 VVQDIFTSPHCVNKGI--------------------IYKAVDDGAGVGLFSLKDPRWSIHRKLLN 129

  Fly   163 PVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGL 227
            |..    ..::....:...|:| ...:|:..:|...:...|.|..:..:||.    :|....:| 
  Fly   130 PAF----GHKVLLSFLPIFNRE-TALLLDQLEPLQDDGEKDLIPLLQSFTLG----IATQTTMG- 184

  Fly   228 LKNSNKESEALKLFHYLDEF-FIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQ--------EVT 283
              :..|:.|:.:....|..: .|:....:|..|||..      .|..|.|.|.:        |:.
  Fly   185 --SDVKDEESFRSNSLLGRYQCILETMTDMCFSPWLN------SRFCRQLAGKESHYYQAKTEIR 241

  Fly   284 LAYVDEAIERLDKEAKEGVVRPENEQSVLEKLLKVDRKVATVMAMDMLMAGV------------- 335
             .::.:.|||  |.|       |:|...|..:...|:.:...:..|::..||             
  Fly   242 -QFIRKIIER--KLA-------EDEMGALPSIQSNDKNLFLNLVTDLMRRGVFTLKNVEDESNII 296

  Fly   336 -----DTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNS-EFTEASMKNVPYLRACIKESQR 394
                 :||::.....|:.||..||.|.|..||:..:.||... :.:.|..:.:.||...:.||.|
  Fly   297 VFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMR 361

  Fly   395 LHPLIVGNARVLARDAVLS-GYRVPAGTYVNIVPLNALTRDE--YFPQASEFLPERWLRSPKDSE 456
            :.|.:...:|..::|..|| |..||.|..: .:.:..:.|.:  :.|.|..|.|:.:|       
  Fly   362 VIPPVPVVSRQTSQDLKLSNGIVVPKGVQI-AIDIYHMHRSKKIWGPDAETFNPDHFL------- 418

  Fly   457 SKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAF--RSAL 519
               |.| ::..:|:.::||..|.|.|:|.|...:..::..|:|:||:..:.::|.||.:  ....
  Fly   419 ---PHN-IQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTSFPFENLYFVEDIT 479

  Fly   520 INLPNIPL 527
            :.|.::||
  Fly   480 MKLKSVPL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 107/499 (21%)
Cyp313a4NP_650224.3 p450 33..465 CDD:299894 103/493 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442735
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.