DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and Cyp313b1

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_649807.1 Gene:Cyp313b1 / 41019 FlyBaseID:FBgn0037601 Length:502 Species:Drosophila melanogaster


Alignment Length:534 Identity:120/534 - (22%)
Similarity:213/534 - (39%) Gaps:122/534 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 WALSMKMSMP----GGKYKNME--LMEMFEAMRQDYGDIFFMPGI--MGNPPFLSTHNPQDFEVV 112
            |.|...:..|    |.:..|.|  |..|....||     |..|.|  ||...||..::|...|.:
  Fly    30 WQLRGPIGWPLIGMGLQMMNPETFLQYMDGLSRQ-----FKAPFISWMGTSCFLYINDPHSVEQI 89

  Fly   113 FR-----NEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIP----TQGKP-WGDFRTVVNPVLMQ 167
            ..     |:|                    |||:.:...|.    |...| |...|.::||..  
  Fly    90 LNSTHCTNKG--------------------DFYRFMSSAIGDGLFTSSSPRWHKHRRLINPAF-- 132

  Fly   168 PKNVRLYYKKMSQVNQEFVQRILEL---RDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLK 229
            .:.:...:..:.....|.:.:.|||   :....||    ....:.:..||:.....:.|::..  
  Fly   133 GRQILSNFLPIFNAEAEVLLQKLELEGVQHGKRLE----IYQILKKIVLEAACQTTMGKKMNF-- 191

  Fly   230 NSNKESEALKLFHYLDEFFIVSIDLEMKPSPWRY----IKTPKLKRLMRALDGIQEVTLAYVDEA 290
               :...:|.:|...:.  :..:.::...|||.|    .:...|.||.:.:.||   ...::::.
  Fly   192 ---QHDGSLCIFKAYNG--LTEVCVKRMLSPWLYPDLIYRRSGLFRLQQKVVGI---LFGFIEQL 248

  Fly   291 IERL----------DKEAKEGVVRPENEQSVLEKLLK-VDRKVATVMAMDM-------LMAGVDT 337
            :|.:          |::..|..:|.:::...:|::.: |:|  ..:...|:       :.|..:|
  Fly   249 LEPIVSVVAANSNPDQQRSEMEMRGKSKAIFIEQVREHVER--GQLSWQDVRDEANVTIAATFET 311

  Fly   338 TSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLH---PLI 399
            ||:.....:||||.:|..|.:|.:|::..|| .:.:.....::.:.|....|.|:.||.   |::
  Fly   312 TSTALYFTILCLAMHPCYQEKLHKELVTELP-PSGDINLEQLQRLEYTEMVINEAMRLFAPVPMV 375

  Fly   400 VGNARVLARDAVL----SGYRVPAGTYVNIVPLNALTRDE--YFPQASEFLPER--WLRSPKDSE 456
            :.:|   .:|..|    ..:.:|.||.:.|...| :.|||  :.|.:..:.|:.  .|.||:   
  Fly   376 LRSA---DQDIQLKRGDGEFLIPRGTQIGIDIYN-MQRDERVWGPLSRTYNPDAHFGLDSPQ--- 433

  Fly   457 SKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAFRSALIN 521
                      .:.|.|:||..|.|||:|.|..:|.::|..||:.|::.:.    ||......|:.
  Fly   434 ----------RHAFAFVPFTKGLRMCIGYRYAQMLMKLLLARIFRSYRIS----TEARLEELLVK 484

  Fly   522 LPNIPLKFKFIDLP 535
             .||.||.|  |.|
  Fly   485 -GNISLKLK--DYP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 107/493 (22%)
Cyp313b1NP_649807.1 CYP313-like 66..498 CDD:410680 109/493 (22%)

Return to query results.
Submit another query.