DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp4d8

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster


Alignment Length:475 Identity:109/475 - (22%)
Similarity:204/475 - (42%) Gaps:98/475 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PGIMGNPPFLSTHNPQDFEVVFRN--------EGVWP-NR----PG----NYTLLYHREEYRKDF 139
            |.::|....:...||:.|..|.|.        :.||. ||    .|    |..||..:|...|..
  Fly    37 PPLIGAMQLMLRLNPKTFIKVGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHP 101

  Fly   140 YQGVM------GVIPTQGKPWGDFRTVVNP-----VLMQPKNVRLYYKKMSQVNQEFVQRILELR 193
            ...|:      |::.:.||.|...|.::.|     :|.|      :.:...|.:...|||:.:..
  Fly   102 VYKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQ------FVEVFDQQSNICVQRLAQKA 160

  Fly   194 DPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSN-------KESEALKLFHYLDEFFIVS 251
            :.:|.    |...:|....|:.::..|:..::....|.:       .|..||..:.::..:..|.
  Fly   161 NGNTF----DVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVE 221

  Fly   252 I--DLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVDEAIERL-DKEAK-----EGVVRPENE 308
            :  .|......||.      .:|:|.:   ||.|:..:::..:.| |:::|     :..|..:..
  Fly   222 LLFTLTHPHLKWRQ------TQLIRTM---QEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRR 277

  Fly   309 QSVLEKLL------------KVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLRE 361
            .::|:.||            ::..:|.|.|     ..|.|||:|..:..|..|:::||.||::.|
  Fly   278 MALLDVLLMSTVDGRPLTNDEIREEVDTFM-----FEGHDTTTSALSFCLHELSRHPEVQAKMLE 337

  Fly   362 EVMKVL-PNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARD-----AVLSGYRVPAG 420
            |:::|| .:::...:...:..:.|:...||||.|::|.:....|.|..|     :|.....:|||
  Fly   338 EIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAG 402

  Fly   421 TYVNIVPLNALTRDEYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGK 485
            :.:.|.......:.|.||...||:|||     .::.|:        ..||..:||..|||.|:|:
  Fly   403 SEIIIGIFGVHRQPETFPNPDEFIPER-----HENGSR--------VAPFKMIPFSAGPRNCIGQ 454

  Fly   486 RIVEMELELGTARLIRNFNV 505
            :..::|:::..|:::|.:.:
  Fly   455 KFAQLEMKMMLAKIVREYEL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 109/475 (23%)
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 102/446 (23%)

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