DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp4d20

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:459 Identity:111/459 - (24%)
Similarity:202/459 - (44%) Gaps:85/459 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YGDIFFMPGIMGNPPFLSTHNPQDFEVVFRNEGVWPNRPGNYTLLYHRE--EYRKDFYQGVMGVI 147
            ||..|.. .|:|. ..:.|.:.|.||.:.          .:.|||...:  ||.:.|...  |::
  Fly    67 YGKTFRF-WILGE-SLIYTKDLQYFETIL----------SSTTLLEKGQLYEYLRPFLND--GLL 117

  Fly   148 PTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWT 212
            .:.|:.|...|.:.... ...|.:..|.:.|.:.:...|..:.::.|..|.      :|     .
  Fly   118 VSTGRKWHARRKIFTHA-FHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTA------VD-----M 170

  Fly   213 LESVSVVALD----KQLGLLKNSNKESE-----ALKLFHYL--DEFFIVSIDLEMKPSPWRY-IK 265
            |:.||:.|||    ..:|:..|:..:.:     |||...|:  |..|..|     :...|.: :.
  Fly   171 LKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFS-----RRYNWLFPLA 230

  Fly   266 TPKLKR-LMRALDGIQEVTLAYVDEAIERLDKEAKEGVVRP----------ENEQSVLEKLLK-- 317
            .|.|.| |:..:..:.:.|...:.|..|.:.:...:|..||          :::.::|:.||:  
  Fly   231 APLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSS 295

  Fly   318 ----------VDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVL-PNKN 371
                      :..:|.|.|     ..|.|||||..:..|..:|::||.|.|:.||:.:|| |:.:
  Fly   296 INNQPLSDADIREEVDTFM-----FEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDAS 355

  Fly   372 SEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYVNIVPLNALTRDEY 436
            :..|:|.::::.||...|||:.||:|.:....|...::..:....:||.|.:.:|...|.....|
  Fly   356 APVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANY 420

  Fly   437 FPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIR 501
            ||....|.|||:|   :|.|        :..|.|.::||..||:.|:|::...:|:::..::::|
  Fly   421 FPDPLSFRPERFL---EDQE--------QGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLR 474

  Fly   502 NFNV 505
            .:.:
  Fly   475 FYEL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 111/459 (24%)
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 110/458 (24%)

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