DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp6a13

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster


Alignment Length:489 Identity:117/489 - (23%)
Similarity:211/489 - (43%) Gaps:104/489 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQDFEVV----------FRNEGVWPNRPGN 125
            |:.:...|..:.:..|...||...:    |:     .|.|::          |.:.|::.|    
  Fly    56 NLRIYRKFRGVERYCGYFTFMTKSL----FI-----MDLELIRDIMIRDFSSFADRGLFHN---- 107

  Fly   126 YTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRI- 189
                     .|.|...|  .::...|..|...|..:..|....| ::..:..|.:|.::..|.. 
  Fly   108 ---------VRDDPLTG--NLLFLDGPEWRWLRQNLTQVFTSGK-MKFMFPNMVEVGEKLTQACR 160

  Fly   190 LELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDL 254
            |::.:   :||.    |...|:|.:.:...|    .||..||.::.|:        :|..:...:
  Fly   161 LQVGE---IEAK----DLCARFTTDVIGSCA----FGLECNSLQDPES--------QFRRMGRSV 206

  Fly   255 EMKPSPWRYIKT-----PKLKRLMRALDGIQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVLE- 313
            ..:|.....::.     |:|.|.:|......||:..::|...:.||...:|.:.|.:..|.::| 
  Fly   207 TQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQTLDYRRRENIHRNDLIQLLMEL 271

  Fly   314 ------KLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNS 372
                  ..|..::..|  .|:...:||.||:|:|.:..|..||.||:.|.|||.||:.||...|.
  Fly   272 GEEGVKDALSFEQIAA--QALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQ 334

  Fly   373 EFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYV------NIVPLNAL 431
            :.|..|::.:|||...:.|:.|.:|::   ..:|.|..  ..|::|....:      .|:|::::
  Fly   335 KLTYDSVQEMPYLDQVVAETLRKYPIL---PHLLRRST--KEYQIPNSNLILEPGSKIIIPVHSI 394

  Fly   432 TRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELG 495
            ..| |.:|...:|.|.|:  .|:         |:|:.:||.:||||.|||.|:|:|..::::::|
  Fly   395 HHDPELYPDPEKFDPSRF--EPE---------EIKARHPFAYLPFGEGPRNCIGERFGKLQVKVG 448

  Fly   496 TARLIRNFNVEFNYPTENAFRSALINLPNIPLKF 529
            ...|:|:|....:..|:            |||||
  Fly   449 LVYLLRDFKFSRSEKTQ------------IPLKF 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 116/488 (24%)
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 117/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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