DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp28a5

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_609694.1 Gene:Cyp28a5 / 34817 FlyBaseID:FBgn0028940 Length:505 Species:Drosophila melanogaster


Alignment Length:511 Identity:125/511 - (24%)
Similarity:199/511 - (38%) Gaps:120/511 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KMSMPG-------GKYKNMELM------EMFEAMRQDYGDIFFMPGIMGN-PPFLSTHNP----Q 107
            |..:||       |.|.||..|      ::.:..|| |.:.:...||.|: .|.|...||    :
  Fly    29 KRGVPGPKPKLLCGNYPNMFTMKRHAIYDLDDIYRQ-YKNKYDAVGIFGSRSPQLLVINPALARR 92

  Fly   108 DFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQ-----GKPWGDFRTVVNPVLMQ 167
            .|...|:|              :|..|..|:..:....:....     |:.|...|..|.|.|..
  Fly    93 VFVSNFKN--------------FHDNEIAKNIDEKTDFIFANNPFSLTGEKWKTRRADVTPGLTM 143

  Fly   168 PKNVRLY--YKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLKN 230
            .:...:|  ..|:.|...|:|::.|.|...|.::|....:    .:|.|.|:...|.  ||....
  Fly   144 GRIKTVYPVTNKVCQKLTEWVEKQLRLGSKDGIDAKHMSL----CFTTEMVTDCVLG--LGAESF 202

  Fly   231 SNKESEALKLFHYLDEFFIVSIDLEMKPSPWRYI-------KTPKLKRLMRALDGIQEVTLAYVD 288
            |:|.:.            |:|...::...||.::       ..|.|..|::         |.:|.
  Fly   203 SDKPTP------------IMSKINDLFNQPWTFVLFFILTSSFPSLSHLIK---------LRFVP 246

  Fly   289 EAIERLDKEAKEGVVRPENEQ----------SVLEKLLK------VDRKVATVMAMDMLMAGVDT 337
            ..:||...:.....|.....|          ..|:.:|:      :|.:.....:|..|:.|.:|
  Fly   247 VDVERFFVDLMGSAVETRRAQLAAGKQFERSDFLDYILQLGEKRNLDNRQLLAYSMTFLLDGFET 311

  Fly   338 TSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHP----- 397
            |::....:||.|.:|.|.|..||||:...|.:....|.:.|  ::|||.||::|:.||.|     
  Fly   312 TATVLAHILLNLGRNKEAQNLLREEIRSHLQDGTIAFEKLS--DLPYLDACVQETIRLFPPGFMS 374

  Fly   398 --LIVGNARVLARDAVLSGYRVPAGTYVNIVPLNALTRD-EYFPQASEFLPERWLRSPKDSESKC 459
              |...:..:..::.  ..:.|..||.| :||......| |:||....|.|||:|          
  Fly   375 NKLCTESIEIPNKEG--PNFVVEKGTTV-VVPHYCFMLDEEFFPNPQSFQPERFL---------- 426

  Fly   460 PANELKSTNPF----VFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPT 511
               |..:...|    ||:.||.|||:|:|.|...::::.....||..|||:.|..|
  Fly   427 ---EPDAAKTFRERGVFMGFGDGPRVCIGMRFATVQIKAAIVELISKFNVKINDKT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 119/493 (24%)
Cyp28a5NP_609694.1 p450 33..500 CDD:299894 124/507 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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