DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and Cyp18a1

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster


Alignment Length:534 Identity:127/534 - (23%)
Similarity:221/534 - (41%) Gaps:153/534 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EWLQAKPFEQIPRL--NMWALSM---KMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPP 99
            :|| .:.:.::.:|  ..|.|.:   .:.|  |..|:...||    :.:.||.:|          
  Fly    41 QWL-VRNYRELRKLPPGPWGLPVIGYLLFM--GSEKHTRFME----LAKQYGSLF---------- 88

  Fly   100 FLSTHNPQDFEVVFRNEGVWPNRPGNYTLL---YHREEY--RKD--FYQGV--MGVIPTQGKPWG 155
              ||.......||.          .:|.::   :.|||:  |.|  |.|.:  .|:|.:.||.|.
  Fly    89 --STRLGSQLTVVM----------SDYKMIRECFRREEFTGRPDTPFMQTLNGYGIINSTGKLWK 141

  Fly   156 DFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRIL-ELRDPDTLEAPDDFIDTINRWTLESVSV- 218
            |.|..::..|.|   ..:.|  |....|:..:||: |:.         :||..::....:.|.: 
  Fly   142 DQRRFLHDKLRQ---FGMTY--MGNGKQQMQKRIMTEVH---------EFIGHLHASDGQPVDMS 192

  Fly   219 ----VALDKQLGLLKNSNKES--------------EALKLF---HYLDEFFIVSIDLEMKPSPWR 262
                ||:...:..|..|.:.|              |.::||   |.:|  :|.:  ::..||   
  Fly   193 PVISVAVSNVICSLMMSTRFSIDDPKFRRFNFLIEEGMRLFGEIHTVD--YIPT--MQCFPS--- 250

  Fly   263 YIKTPKLKRLM-----------------RALD--GIQEVTLAYVDE----AIERLDKEAKEGVVR 304
             |.|.|.|...                 |:.|  .|:::...|:.|    ..|..|.|..:|   
  Fly   251 -ISTAKNKIAQNRAEMQRFYQDVIDDHKRSFDPNNIRDLVDFYLCEIEKAKAEGTDAELFDG--- 311

  Fly   305 PENEQSVLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKV--- 366
             :|.:   |:|::|        .:|:..||::|..:|...:.:.:.:||::..|:::|:.:|   
  Fly   312 -KNHE---EQLVQV--------IIDLFSAGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGR 364

  Fly   367 --LPNKNSEFTEASMKNVPYLRACIKESQRLHPLI-VGNARVLARDAVLSGYRVPAGTYVNIVPL 428
              ||      |...::.:|...:.|.||.|...:: :.......||..|:||.:|||::|  :||
  Fly   365 HRLP------TIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHV--IPL 421

  Fly   429 -NALTRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEME 491
             |::..| ..:.:..||.|.|::    |:|.|.       ..|..|:|||.|.|||:|..:..||
  Fly   422 INSVHMDPNLWEKPEEFRPSRFI----DTEGKV-------RKPEYFIPFGVGRRMCLGDVLARME 475

  Fly   492 LELGTARLIRNFNV 505
            |.|..|..:..|::
  Fly   476 LFLFFASFMHCFDI 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 117/487 (24%)
Cyp18a1NP_523403.2 CYP306A1-like 85..515 CDD:410745 116/483 (24%)

Return to query results.
Submit another query.