DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp4d1

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:518 Identity:124/518 - (23%)
Similarity:223/518 - (43%) Gaps:117/518 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 IFFMPG------------IMGNPP---------FLSTH-------------------NPQDFEVV 112
            |.:|||            .:|.||         |:.|:                   ||:|.|||
  Fly    31 ISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVV 95

  Fly   113 FRNEGV--WPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYY 175
            .   |.  :.::.|.|..|   |.:.|:      |::.::|:.|...|.::.|.        .::
  Fly    96 L---GTLRFNDKAGEYKAL---EPWLKE------GLLVSRGRKWHKRRKIITPA--------FHF 140

  Fly   176 KKMSQVNQEF---VQRILELRDPDTLEAPD---DFIDTINRWTLESVSVVALDKQLGLLKNSNKE 234
            |.:.|..:.|   .:.:|...:.|.|:..|   ...|.||..|::::...|:...:....|::.|
  Fly   141 KILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAMGVSINAQSNADSE 205

  Fly   235 -SEALK---------LFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVDE 289
             .:|:|         :|:.|..|     ||       .|:.||..:...:||:.:.:.|...:.:
  Fly   206 YVQAVKTISMVLHKRMFNILYRF-----DL-------TYMLTPLARAEKKALNVLHQFTEKIIVQ 258

  Fly   290 AIERLDKEAK-------EGVVRPENEQSVLEKLLK--VDRKVATVM----AMDMLM-AGVDTTSS 340
            ..|.|.:|..       :..|..:.:.:.|:.||:  ||.:..:.:    .:|..| .|.|||||
  Fly   259 RREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSS 323

  Fly   341 TFTALLLCLAKNPEKQARLREEVMKVLPN-KNSEFTEASMKNVPYLRACIKESQRLHPLIVGNAR 404
            ........:|.:||.|.:..||:..|:.| |::..:...:..:.|:..|:||:.|::|.:....|
  Fly   324 ALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGR 388

  Fly   405 VLARDAVLSGYRVPAGTYVNIVPLNALTRDEYFPQASEFLPERWLRSPKDSESKCPANELKSTNP 469
            .:..|..::|..:||||.:.|.||....|:|.|.:.:.|.|||:       :....|.:|   ||
  Fly   389 KVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERF-------DVVTTAEKL---NP 443

  Fly   470 FVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEF--NYPTENAFRSALINLPNIPLKFK 530
            :.::||..|||.|:|::...:|::...|.::|::.|:|  :........:.||.....||.||
  Fly   444 YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 121/514 (24%)
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 112/472 (24%)

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