DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp12d1-d

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster


Alignment Length:507 Identity:217/507 - (42%)
Similarity:331/507 - (65%) Gaps:12/507 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NVATAEAREDSEWLQAKPFEQIPRLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPG 93
            :|...|..:.|...:.|.:::|||.|.:.. |:..||||:::|..:.|...|||:.||||:.|||
  Fly    24 SVLAHEQAKSSITEEHKTYDEIPRPNKFKF-MRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPG 87

  Fly    94 IMGNPPFLSTHNPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFR 158
            :.|...:::|.|.:|.|:||||||:||.|.|..:::|.||..|.|.|..|.|::.:|.:.||..|
  Fly    88 MFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLR 152

  Fly   159 TVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDK 223
            :.:||:.|||:.:|:||:.:|.:|.||::||.|:|||.|||.|:||.|.|:|...||:.:||.|:
  Fly   153 SAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDR 217

  Fly   224 QLGLLKNSNKESEALKLFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVD 288
            |:||::.:...|:||.||....:.|.::..|:::||.|:.|.||..:::.|.|:....|:...:.
  Fly   218 QMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLK 282

  Fly   289 EAIERLDKEAKEGVVRPENEQSVLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNP 353
            |..:.|:|..:.|  ...|..|:||:|:::|.|||.:|::|:|.||||.|::..:|:||||:|:|
  Fly   283 ENQDALEKRRQAG--EKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHP 345

  Fly   354 EKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVP 418
            :|||:||||::.::|.|:|...|.:||::|||||.|||:.|.:|...|..|....|.:|||||||
  Fly   346 DKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVP 410

  Fly   419 AGTYVNIVPLNALTRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMC 482
            .||.| ::..|.|.:: .|:|:..|||||||||.|:..:.       ...:||.|||||||||||
  Fly   411 KGTTV-LLGSNVLMKEATYYPRPDEFLPERWLRDPETGKK-------MQVSPFTFLPFGFGPRMC 467

  Fly   483 VGKRIVEMELELGTARLIRNFNVEFNYPTENAFRSALINLPNIPLKFKFIDL 534
            :|||:|::|:|...|:|||||:||||......|::..:..|.|...|||.|:
  Fly   468 IGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDI 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 200/459 (44%)
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 197/447 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445009
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I2311
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 1 1.000 - - FOG0000720
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
109.900

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