DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and cyp-35B2

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_504094.1 Gene:cyp-35B2 / 187093 WormBaseID:WBGene00019471 Length:499 Species:Caenorhabditis elegans


Alignment Length:540 Identity:131/540 - (24%)
Similarity:225/540 - (41%) Gaps:107/540 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 WLQAKPFEQIPRLNMWALSMKM--SMPGGKY---KNMELMEMFEAMRQDYGDIFFMPGIMGNPPF 100
            :|.|:.:::..:|....:|:.:  ::|...|   :...::..|:..||.|||:|.:  .:|..|.
 Worm    13 FLVARQYQKAKKLPPGPVSLPLIGNIPQLVYYIWREKGVVPAFDLFRQIYGDVFTI--WLGPIPH 75

  Fly   101 LSTHNPQDFEVVFRNEG----------VWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWG 155
            :|..:....:.||...|          |:.:...|                  :|::...|:.|.
 Worm    76 VSICDYDTSQEVFVKNGSRLIDRFLPPVFLHLSNN------------------LGLVSANGEVWA 122

  Fly   156 DFRTVVNPVLMQPKNVRLYYKKMSQ-VNQEFVQRILELRDPD-----TLEAPDDFIDTINRWTLE 214
            :.|..   .|:..:|:.:....|.: :.:|...|..|: |.|     |:....||.|.       
 Worm   123 EMRRF---TLLAFRNIGVGRDSMEERILEELDARCEEI-DADAVNGKTVVQTSDFFDL------- 176

  Fly   215 SVSVVALDKQLGLLKNSNKESEALKLFHYLD---EFFIVSIDLEMKPSPWRYIKTPKLKRLMRAL 276
            :|..:..:..:|...|::.:.|.:||...:|   :.|.: .||   .:|...:|....||..|.|
 Worm   177 AVGSIINNTLIGKRFNAHNKDEFMKLKKMMDSASDLFTI-FDL---TAPVWMLKILVPKRCERIL 237

  Fly   277 DGIQEVTLAYVD-EAIERLDK-EAKEGVVRPENEQSVLE----KLLKVDR---------KVATVM 326
             |:||..|.:|. ||.||.:: ::.|..|..||....:|    |:.:..|         |....:
 Worm   238 -GVQEEILNFVSREANERYEQLKSGEYTVNAENPHDFVEAYFAKMEEEKRHGGPTPYTMKCLKHV 301

  Fly   327 AMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKE 391
            ..|:.:||.|||::|..:....|..:||...:.|||::::..|.:............||.|.|.|
 Worm   302 IGDLWLAGQDTTTTTLVSGFNQLVNHPEVIRKCREEILRITENGSRPLQLKDRAESHYLNATITE 366

  Fly   392 SQRLHPLI--VGNARVLARDAVLSGYRVPAGTYVNIVPLNAL-TRDEYFPQASEFLPERWLRSPK 453
            .|| |..|  |...|::.....:.||.:.:|| |....|.|| ..::.|..|.:|.|||::.:.|
 Worm   367 IQR-HASILNVNFWRLINEPTNVKGYEIDSGT-VMTAQLGALHVNNDIFKNADKFYPERFIENGK 429

  Fly   454 DSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAFRSA 518
                  ..|::        :|||.|.|.|||:.:...||.|.|..|:..:|:.    ...:..|.
 Worm   430 ------LLNQV--------IPFGIGKRSCVGENLARSELYLLTGNLLLRYNIR----PHGSLPST 476

  Fly   519 LINLP---------NIPLKF 529
            ...||         |:.|:|
 Worm   477 ADQLPYSAGKMPDKNVHLEF 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 125/504 (25%)
cyp-35B2NP_504094.1 p450 26..453 CDD:278495 116/478 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574756at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.