DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and cyp-33D1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_507076.1 Gene:cyp-33D1 / 187025 WormBaseID:WBGene00010589 Length:492 Species:Caenorhabditis elegans


Alignment Length:504 Identity:126/504 - (25%)
Similarity:205/504 - (40%) Gaps:111/504 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQDFEVVFRNEG-VWPNRPGNYTLLYHREEYRKDF 139
            ::|...::::|.:|..  .:.:.||:...:.:..:..|..:| .:.::..|        :..|..
 Worm    47 DIFHKWKKEFGPVFTF--WLADRPFIFITSYEVMKETFVKDGDTFADKQLN--------QIDKKK 101

  Fly   140 YQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDF 204
            .|...||:.|.|:.|.:.|..   .|.|.:::.| .|.:.|      ::||       ||..:.|
 Worm   102 LQRNYGVLDTNGEMWREHRRF---TLSQLRDLGL-GKDLMQ------EKIL-------LEIEEQF 149

  Fly   205 IDTINRWTLESVSVVA-LDKQLG-----LLKNSNKESEALKLFHYL-----------DEF----- 247
            .| ||....|.:.:.: ||:.:|     .|.|...|:.....|.||           .||     
 Worm   150 KD-INSHLGEEIDLPSVLDRGVGNVINLTLFNKRFETNQRDEFTYLKSLIDGLRDVASEFRYFIQ 213

  Fly   248 FIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVL 312
            |:|....::.|.|....||..:|         :|:.:.:|.: :|...||.....|   .....:
 Worm   214 FLVPWSSKIIPGPTLGDKTKGMK---------EELDVFFVKQ-VEEHRKEIDFDTV---ESYDYV 265

  Fly   313 EKLLKVDRKVAT-------------VMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVM 364
            |..||..:|...             .|..|:.|||:.||:.|.|........|.:.|.::|||:.
 Worm   266 EAYLKEQKKREADGDHETFCNKQLYAMCFDLWMAGLQTTTVTLTWGFSFYLHNADVQLKIREELD 330

  Fly   365 KVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGN-ARVLARDAVLSGYRVPAGTYVNIVPL 428
            :|:.| :...|.|....:|||.|.|.|:||...:|..| ..|..||.|:.||.|..||.| |..:
 Worm   331 RVIGN-DRLITTADKNCLPYLTAFINETQRCANIIPFNLLHVATRDTVIEGYPVKKGTGV-IAQI 393

  Fly   429 NALTRDE-YFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMEL 492
            ..:..|| .||.|..|.|.|::.:.|          ||..:..:  ||..|.|.|:|:.:..|||
 Worm   394 GTVMSDEQIFPDAHCFNPGRFIENGK----------LKKVDEVI--PFSIGKRQCLGEGLARMEL 446

  Fly   493 ELGTARLIRNFNVEFNYPTENAFRSALINLPNI---------PLKFKFI 532
            .|..|.:...::|:.::..         |||::         |.||..:
 Worm   447 FLFFANIFNRYDVQLDFSG---------NLPDLDKSKDNFVTPRKFNAV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 126/501 (25%)
cyp-33D1NP_507076.1 p450 26..482 CDD:278495 124/498 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4812
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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