DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and cyp27a1.2

DIOPT Version :10

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_031749759.1 Gene:cyp27a1.2 / 116407844 XenbaseID:XB-GENE-29093451 Length:546 Species:Xenopus tropicalis


Alignment Length:527 Identity:142/527 - (26%)
Similarity:252/527 - (47%) Gaps:69/527 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VATAEAREDSEWLQAKPFEQIPRLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGI 94
            ||.|......|..:.|.||.:|..::......:.:.|......||..::   :::||.::  ...
 Frog    57 VAGAAVGAVGEEKKMKTFEDLPGPSLLTNIYWVFLRGYILYTHELQAIY---KKNYGPMW--KST 116

  Fly    95 MGNPPFLSTHNPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRT 159
            :|....::..:....|.|.|.||.:|.|........||.:  :|.   .:|....:|..|...|:
 Frog   117 LGRYKTVNIADVDILETVLRQEGKYPVRIDMEVWKEHRRQ--RDL---SLGPFTEEGHKWHTLRS 176

  Fly   160 VVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAP-----DDFIDTINRWTLESVSVV 219
            |:|..:::|....||...:::|..:|:.|:.|:|.    |.|     :|..:.:.|:..|.:|.:
 Frog   177 VLNKRMLKPAEAMLYTGVVNEVVTDFLVRLEEMRS----ETPSGDMVNDIPNALYRFAFEGISYI 237

  Fly   220 ALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDLEMKP-------SPWRYIKTPKLKRLMRALD 277
            ..:.::|.|:         |......:.||.||...:|.       .||.....|..||.|.:.|
 Frog   238 LFETRIGCLE---------KQIPVETQRFIDSIGAMLKNYIFVTILPPWTNNLLPYYKRYMDSWD 293

  Fly   278 GIQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVLEKLLK--------VDRKVATVMAMDMLMAG 334
            .|.......::|.:::::       .|.|.::.|..:.|.        .|:::...:| ::|:||
 Frog   294 NIFAFGNKLINEKMKKIE-------ARLERDEEVQGEYLTYLISSGKLTDKEIYGSVA-ELLLAG 350

  Fly   335 VDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLI 399
            |||||:|.:..|..||:.||.|..|.:||:.|:|.:|.. |...:.::|.|||.|||:.||:|::
 Frog   351 VDTTSNTLSWALYHLAREPEIQNALYQEVIGVVPGQNIP-TSEDISSMPLLRAVIKETLRLYPVV 414

  Fly   400 VGNARVLARDAVLSG-YRVPAGTYVNIVPLNALTRDE-YFPQASEFLPERWLRSPKDSESKCPAN 462
            ..|:||....|:..| |..|..|.:.:...: ::||| .||::.:|:|:||.|     ||:.   
 Frog   415 PTNSRVAVEKAITIGDYYFPKDTLIALHHYH-ISRDEKNFPESDKFIPQRWFR-----ESRV--- 470

  Fly   463 ELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAFRS--ALINLPNI 525
               ..|||..:|||:|.|.|||:||.|:|:.:..:|:|:.:.|..: |:....:|  .::..|:.
 Frog   471 ---KNNPFSSIPFGYGVRACVGRRIAELEMHMCLSRIIKKYEVRPD-PSGAEIKSMARIVLTPHK 531

  Fly   526 PLKFKFI 532
            |:..:|:
 Frog   532 PINLQFL 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 CYP24A1-like 82..528 CDD:410677 130/469 (28%)
cyp27a1.2XP_031749759.1 cytochrome_P450 106..535 CDD:477761 130/470 (28%)

Return to query results.
Submit another query.