DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and Cyp27b1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_446215.1 Gene:Cyp27b1 / 114700 RGDID:69192 Length:501 Species:Rattus norvegicus


Alignment Length:498 Identity:131/498 - (26%)
Similarity:223/498 - (44%) Gaps:77/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQDFEVVFRNEGVWPNRPGNYTLLYH 131
            |....:..:::..|.|  ||.|:  .|..|....:...:|...|.:.|.|...|.|....:...|
  Rat    49 GGLSRLHELQVHGAAR--YGPIW--SGSFGTLRTVYVADPALVEQLLRQESHCPERCSFSSWSEH 109

  Fly   132 REEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRD-- 194
            |..     :|...|::...|:.|...|:::.|:|::|:....|...:..|..:.|:|:...|.  
  Rat   110 RRR-----HQRACGLLTADGEEWQRLRSLLAPLLLRPQAAAGYAGTLDSVVSDLVRRLRRQRGRG 169

  Fly   195 ---PD-TLEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDLE 255
               || .|:...:|.    ::.||.:..|.|..:||.|: :....:.......:...|:.:: |.
  Rat   170 SGLPDLVLDVAGEFY----KFGLEGIGAVLLGSRLGCLE-AEVPPDTETFIEAVGSVFVSTL-LT 228

  Fly   256 MK---------PSPWRYIKTPKLKRLMRALDGIQEVTLAYVDEAIERLDKEA---KEGVVRPENE 308
            |.         |.||        .||.|..|.:    .|:..:.:|:.:.||   .:|  :||.:
  Rat   229 MAMPSWLHRLIPGPW--------ARLCRDWDQM----FAFAQKHVEQREGEAAVRNQG--KPEED 279

  Fly   309 --------QSVLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVM- 364
                    ..:..:.:.|...|..|  .::|:|||||.|:|.:..|..|:::||.|:.|..|:. 
  Rat   280 LPTGHHLTHFLFREKVSVQSIVGNV--TELLLAGVDTVSNTLSWALYELSRHPEVQSALHSEITG 342

  Fly   365 KVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYVNIVPLN 429
            .|.|...:.....::..:|.|:|.|||..||:|::.||:||..||..:..|.:|..|.|::... 
  Rat   343 AVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVPGNSRVPDRDICVGNYVIPQDTLVSLCHY- 406

  Fly   430 ALTRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELE 493
            |.:|| ..|.:.:.|.|.|||     .|...|       :||..||||||.|.|:|:|:.|:||:
  Rat   407 ATSRDPAQFREPNSFNPARWL-----GEGPAP-------HPFASLPFGFGKRSCIGRRLAELELQ 459

  Fly   494 LGTARLIRNFNV---EFNYPTENAFRSALINLPNIPLKFKFID 533
            :..|:::.:|.|   ....|.:...|:.|:  |...:..:|:|
  Rat   460 MALAQILTHFEVLPEPGALPVKPMTRTVLV--PERSIHLQFVD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 128/489 (26%)
Cyp27b1NP_446215.1 CYP27B1 61..496 CDD:410741 128/480 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3026
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3706
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8942
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

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