DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and LOC101731070

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_031760322.1 Gene:LOC101731070 / 101731070 -ID:- Length:517 Species:Xenopus tropicalis


Alignment Length:541 Identity:141/541 - (26%)
Similarity:233/541 - (43%) Gaps:98/541 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TNVATAEAREDSEWL-----QAKPFEQIP--RLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDY 85
            |:.:|.:..:||:.|     |:.||:.||  ..|.|| ::........::.:.|  :.|...|:.
 Frog    31 THFSTVQLAQDSQSLTSAKAQSLPFKSIPCTGRNAWA-NLARYWKNNSFQQLHL--VMEGHFQNL 92

  Fly    86 GDIFFMPGIMGNPPFLSTH------NPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVM 144
            |.|:        ...|.||      :|||...:|::|||:|.|.|......||     |......
 Frog    93 GPIY--------RETLGTHSSVNIIHPQDVARLFQSEGVFPRRMGIEAWAAHR-----DLRNHKC 144

  Fly   145 GVIPTQGKPWGDFRTVVNPVLMQPKNVRLYYKKMSQVNQEFV---QRILELRDPDTLEAPDDFID 206
            ||....|:.|...|.::|..::....|:.:...:.:|..:||   .|.:......||..  |...
 Frog   145 GVFLLNGEDWRSDRLILNKEVLSLTGVKKFLPFLDEVANDFVSFLMRRINKNTRGTLTV--DLYA 207

  Fly   207 TINRWTLESVSVVALDKQLGLLKNSNKESEALKLFHYLDEFFIVSIDLEMKPS-PWRYIKTPKLK 270
            .:.|:|:|:...|...::||||:....| ::|:        ||.:::..:|.: |..|:.    .
 Frog   208 DLFRFTMEASGYVLYGQRLGLLEEHPNE-DSLR--------FIRAVETMIKTTLPLVYLP----H 259

  Fly   271 RLMRALDG--------IQEVTLAYVDEAIERLDKEAKEGVVRPEN---EQSVLEKLLKVDRKVAT 324
            :|:|..|.        ..:|.....|..|:.:.:|...|..|..:   .:.:|:..|.:|...|.
 Frog   260 QLLRLTDSALWTQHMEAWDVIFQQADRCIQNIYQEFCLGQERGYSGIMAELLLQGELPLDSITAN 324

  Fly   325 VMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKV---LPNKNSEFTEASMKNVPYLR 386
            |  .:::..|||||:......|..||:||..|..||.|:.:.   .|...::.    :.::|.|:
 Frog   325 V--TELMAGGVDTTAMPLLFTLFELARNPSVQQELRAEIKRAEGQCPKDMNQL----LNSMPLLK 383

  Fly   387 ACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYVNI--VPLNALTRDEYFPQASEFLPERWL 449
            ..|||:.||:|:.:...|...:|.||..|.:||||.|.:  .|:.  ...|.|.....:.|.||:
 Frog   384 GAIKETLRLYPVGITVQRYPMKDIVLQNYHIPAGTLVQVGLYPMG--RSSELFQNPLRYDPTRWM 446

  Fly   450 RSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENA 514
            |..:             || |..|.||||.|.|:|:||.|.|:.|....:|:||.:.        
 Frog   447 RRDE-------------TN-FKALAFGFGSRQCIGRRIAETEMMLFLMHMIKNFQIN-------- 489

  Fly   515 FRSALINLPNIPLKFKFIDLP 535
                .:...:|...|:||.:|
 Frog   490 ----TVCKDDIKTVFRFILMP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 125/484 (26%)
LOC101731070XP_031760322.1 CYP11B 89..514 CDD:410737 126/480 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.