DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and XB5798854

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001120076.1 Gene:XB5798854 / 100145084 XenbaseID:XB-GENE-5798855 Length:497 Species:Xenopus tropicalis


Alignment Length:450 Identity:113/450 - (25%)
Similarity:169/450 - (37%) Gaps:133/450 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 FLST--HNPQDFEVV---FRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGD--- 156
            |:|.  |.||....:   .||.||     |..||   .|:.:|:..|.|..:....|||:..   
 Frog   116 FVSANDHWPQFRRYILTTLRNIGV-----GKQTL---EEKSQKEAEQLVQAMSEMGGKPFNPSHL 172

  Fly   157 ----FRTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVS 217
                ...::..||                   |.|: |:.||                       
 Frog   173 LGCAVSNIIGAVL-------------------FGQQ-LDYRD----------------------- 194

  Fly   218 VVALDKQLGLLKNSNKE-SEALKLFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQE 281
                .|.|.|:.|..|. |..|.:.|.:...|           |: .:|.|.|.::      |.:
 Frog   195 ----KKLLDLITNIRKHVSNVLSMKHQICNMF-----------PF-LLKLPYLGQI------IMK 237

  Fly   282 VTLAYVDEAIERLD--KEAKEGVVRPENE--QSVLEKLLKVDRKVA--------TVMAMDMLMAG 334
            .:|..||...|:||  ||..: :..|..:  ...|.|:.:..||..        |:.:..:|:||
 Frog   238 NSLYLVDYVREQLDFHKETLD-IAAPPRDFIDHFLLKIKEESRKEGTKFHELSLTMYSSGLLIAG 301

  Fly   335 VDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQR---LH 396
            ||||:||....:..:|..|..||:::.|:..|..::... ..:....:||..|.|.|.||   |.
 Frog   302 VDTTTSTLKFCVTVIAHLPHIQAKVQREIDDVTGSQRPP-GMSDRAQMPYTNAVIHELQRHLDLA 365

  Fly   397 PLIVGNARVLARDAVLSGYRVPAGT----YVNIV---PLNALTRDEYFPQASEFLPERWLRSPKD 454
            |..:.:|  |..|....||..|.||    |::.|   |....|.||:.|  ..||.|:.....| 
 Frog   366 PAALFHA--LREDTEFHGYTFPKGTRILPYLSSVLFDPSQWETPDEFNP--GHFLDEKGQFRAK- 425

  Fly   455 SESKCPANELKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENA 514
                 ||          |:.|..|.|.|:|..:..||:.|..:.|::.|::   .||..|
 Frog   426 -----PA----------FMVFSAGKRECLGVSLARMEIFLFFSALLQKFSL---CPTTGA 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 112/449 (25%)
XB5798854NP_001120076.1 p450 34..461 CDD:278495 110/439 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574756at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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