DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a4 and cyp24a1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001082927.1 Gene:cyp24a1 / 100004700 ZFINID:ZDB-GENE-060825-1 Length:505 Species:Danio rerio


Alignment Length:515 Identity:138/515 - (26%)
Similarity:239/515 - (46%) Gaps:87/515 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AKPFEQIPRLNMWAL---SMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTH- 104
            |...:.||....|.|   .:::...||..:..|.:..|   .:.:|.||.|.  :|:  |.|.| 
Zfish    46 AHSLDSIPGPTNWPLFGSLIEVIRNGGLKRQHETLIHF---HKKFGKIFRMK--LGS--FESVHI 103

  Fly   105 -NPQDFEVVFRNEGVWPNR----PGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPV 164
             :|...|.::|.||.:|.|    |.        :.|| |......|::..:|:.|...|:.....
Zfish   104 GSPCLLEALYRKEGSYPERLEIKPW--------KAYR-DMRDEAYGLLILEGRDWQRVRSAFQQK 159

  Fly   165 LMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLK 229
            ||:|..|.....|:::|..:.::||.::..     ..|.....:|:|:.|::..|..||:.|||:
Zfish   160 LMKPTEVMKLDGKINEVAADLIKRIGKVNG-----KMDALYFELNKWSFETICYVIYDKRFGLLQ 219

  Fly   230 NS-NKESEALKLFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVD--EAI 291
            :| :||.        :|  ||.::...|.......:...:|.:.:.        |..:.|  ||.
Zfish   220 DSVSKEG--------MD--FITAVKTMMSTFGTMMVTPVELHKTLN--------TKTWKDHTEAW 266

  Fly   292 ERLDKEAKEGVVRPENEQSVLE------------KLLKVDRKVATVMAMDMLMAGVDTTSSTFTA 344
            :|:...||..:.:...:||..|            .|.|.:...||.   ::.:.||:||:::...
Zfish   267 DRIFSTAKHYIDKNLQKQSNGEADDFLSDIFHNGNLTKKELYAATT---ELQVGGVETTANSMLW 328

  Fly   345 LLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARD 409
            ::..|::||..|.:|.:|:..|:|...:...| .:|::|||:||:|||.|:.|.:...:|.|.:|
Zfish   329 VIFNLSRNPCAQGKLLKEIQDVVPAGQTPRAE-HIKSMPYLKACLKESMRVSPSVPFTSRTLDKD 392

  Fly   410 AVLSGYRVPAGTYVNIVPLNAL---TRDEYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFV 471
            .||..|.:|.||   ::.||:.   ..:|||....:|.|||||            .|..|.|||.
Zfish   393 TVLGDYTLPKGT---VLMLNSQAIGVSEEYFDNGRQFRPERWL------------EEKSSINPFA 442

  Fly   472 FLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFN--YPTENAFRSALINLPNIPLKF 529
            .:|||.|.|||:|:|:.|::::||...::|::.:...  .|.::.....|:....:|:.|
Zfish   443 HVPFGVGKRMCIGRRLAELQIQLGLCWILRDYKIVATDLEPVDSLHSGTLVPSRELPVAF 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 131/484 (27%)
cyp24a1NP_001082927.1 p450 53..493 CDD:278495 133/497 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 1 1.000 - - FOG0000720
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 1 0.900 - - OOG6_100895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.870

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