DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a5 and cyp27a1.3

DIOPT Version :9

Sequence 1:NP_650782.1 Gene:Cyp12a5 / 42293 FlyBaseID:FBgn0038680 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_002934001.3 Gene:cyp27a1.3 / 594905 XenbaseID:XB-GENE-18386061 Length:518 Species:Xenopus tropicalis


Alignment Length:542 Identity:157/542 - (28%)
Similarity:254/542 - (46%) Gaps:75/542 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QQRWQTNVPTAEIRNDP----------EWLQAKPFEEIPKANILSLFAKSALPGGKYKNLEMMEM 77
            ||..:.||.|  :|...          |....|..:::|..:.|.|.....|.|..::..|:..:
 Frog    15 QQSCRANVQT--VRKKATLGVSGATVVEGKTLKTLDDLPGPSPLKLLYWIFLRGYLFRTHELQVI 77

  Fly    78 IDALRQDYGNIIFLPGMMGRDGLVMTHNPKDFEVVFRNEGVWPFRPGSDILRYHRTVYRKDFFDG 142
               .::.||.:..:...  :..:|...:|...|.:.|.||.:|.|....|:|.||.:....:   
 Frog    78 ---FKKTYGPMWKMSDR--QHAMVTVASPDLLESLLRKEGKYPTRADMFIMREHRDLRGHSY--- 134

  Fly   143 VQGIIPSQGKSWGDFRSIVNPVLMQPKNVRLYFKKMSQVNQEFVELIKEI--RDASTQEVPGNFL 205
              |.:..:|..|...|:|:|..:::|:...:|...|::|..:.:..|||:  :.:|..:|.| ..
 Frog   135 --GPVTEEGHQWHRIRTILNQRMLKPRETVVYAGSMNEVVSDLLLKIKELTAQSSSGTQVNG-VA 196

  Fly   206 ETINRWTLESVSVVALDKQLGLLRESGKNSE-ATKLFKYLDEFFLHSADLEMKPSL--WRYFKTP 267
            |.:.::..||:..|..:.:||.|     |.| ..:..|::|...:....|.|...|  |.....|
 Frog   197 ELMYKFAFESICTVLFETRLGCL-----NKEILPETQKFIDSIGIMLEHLTMLTRLPQWTKGILP 256

  Fly   268 LLKKMLRTMDSVQEVTLKYVDEAIERLEKEAKEGVVRPEHEQSVLEKLL---KVDKKVATVMAMD 329
            ...:.:...|::.:...|.:|:.:|.:|...|.|   .|.|...|..||   |:..:......::
 Frog   257 YWGRYIEAWDTIFDFGKKLIDKKMEDIEGRLKRG---EEVEGEYLTYLLSSGKLSMEEVYGSVVE 318

  Fly   330 MLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNK---DSEFTEASMKNVPYLRACIKE 391
            :|.|||||||:|.|..|..|::|||.|..|.:||::|:|.:   |||    ::..:|.|:|.|||
 Frog   319 LLQAGVDTTSNTLTWALYQLSRNPEIQNNLYQEVIRVIPGETIPDSE----AIARMPLLKAVIKE 379

  Fly   392 SQRVYPLVIGNARGLTRDSV-ISGYRVPAGT--IVSMIPINSLYSEEYFPKPTEFLPERWLRNAS 453
            :.|::|:|..|||.:....| |..|..|..|  |:....|:.  .|..||:...||||||||   
 Frog   380 TLRLFPVVPENARMINEKEVTIKDYVFPVKTQFILGHYAISR--DETTFPEADRFLPERWLR--- 439

  Fly   454 DSAGKCPANDLKTKNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNV-------EFNHST 511
            ||..|        .:||..:|||:|.|.|||:||.|:|:.|..:|:|:.|.|       |.  ..
 Frog   440 DSGMK--------HHPFGSIPFGYGVRACVGRRIAELEMHLALSRIIKMFQVIPDPDLGEV--GA 494

  Fly   512 KNAFRSALINLPNIPLKFKFTD 533
            ||  |:.|:  .|.|:..:|.:
 Frog   495 KN--RAVLV--ANRPVNLRFIE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a5NP_650782.1 p450 81..531 CDD:278495 142/470 (30%)
cyp27a1.3XP_002934001.3 cytochrome_P450 79..508 CDD:425388 142/467 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

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