DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a5 and cyp27a1.4

DIOPT Version :9

Sequence 1:NP_650782.1 Gene:Cyp12a5 / 42293 FlyBaseID:FBgn0038680 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001315442.1 Gene:cyp27a1.4 / 322341 ZFINID:ZDB-GENE-030131-1060 Length:522 Species:Danio rerio


Alignment Length:539 Identity:142/539 - (26%)
Similarity:251/539 - (46%) Gaps:61/539 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KPIVFSASQQRWQTNVPTAEIRNDPEWLQAKPFEEIPKANILSLFAKSALPGGKYKN----LEMM 75
            :|...:...:|...|...|.:.......:.|...::|:..|.::..:....|  |.|    |::.
Zfish    19 RPTTAATGFRRAAGNSAAASVSVQDGHRKLKTEADLPEIKIFTMLYQMLFKG--YLNSVHELQLY 81

  Fly    76 EMIDALRQDYGNI--IFLPGMMGRDGLVMTHNPKDFEVVFRNEGVWPFRPGSDILRYHRTVYRKD 138
            :     :|.||.:  |....:.|    :...:.:..|.:.|.:..:|.|....:...||.:    
Zfish    82 Q-----KQVYGPLWKINAGNLQG----ISITSVELLEELLRKDEKYPCRGYMTLWTEHRDL---- 133

  Fly   139 FFDGVQ-GIIPSQGKSWGDFRSIVNPVLMQPKNVRLYFKKMSQVNQEFVELIKEIRDAS-TQEVP 201
              .|:. |....:|:.|...|:::|..::.||:...|...::.|..:|::.|..:|:.| |.::.
Zfish   134 --RGISYGPFTEEGEKWYKLRAVLNKRMLHPKDSLQYGDVVNAVITDFIKRIYYLREMSPTGDLV 196

  Fly   202 GNFLETINRWTLESVSVVALDKQLGLLRESGKNSEATKLFKYLDEFFLHSADLEMKPSLWRYFKT 266
            .|....:.|::||.::.:..:.::|.| |....:|..:....:.:.|.::..:.:.|: |.....
Zfish   197 SNLTNELYRFSLEGIASILFETRIGCL-EKEIPAETQEFINSIAQMFTYNMHVALLPN-WTRNYL 259

  Fly   267 PLLKKMLRTMDSVQEVTLKYVDEAIERLEKEAKEGVVRPEHEQSVLEKLL-------KVDKKVAT 324
            |..:|.:...|.:.:...|.::..:|.::       .|.:..|.|..:.|       |:..|...
Zfish   260 PFWQKYIDGWDGIFKFGTKMINLKMEAIQ-------TRLDTNQEVAGEYLTYLLSSGKMSCKDVY 317

  Fly   325 VMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQARLREEVMKVLPNKDSEFTEASMKNVPYLRACI 389
            ....::|:|||||||:|....|..|:|:|..|..|.:||.|||.. |...|...:.::|:|:|.|
Zfish   318 GSVSEVLLAGVDTTSNTMLWALYLLSKDPAAQETLHQEVTKVLKG-DRIPTAEEVNSMPFLKAVI 381

  Fly   390 KESQRVYPLVIGNARGLTRDSVISG-YRVPAGTIVSMIPINSLYSEEYFPKPTEFLPERWLRNAS 453
            ||:.|:||:|..|:|.:....||.| |..|..|..::......:.|:.||:|.:|.||||||   
Zfish   382 KETLRLYPVVPVNSRLIAESEVIIGEYLFPKKTTFNLFHYAISHDEKVFPEPQKFKPERWLR--- 443

  Fly   454 DSAGKCPANDLKTK-NPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNHS---TKNA 514
                     |.:|: |||..:|||||.|.|||:||.|:|:.|..||||:.|.:..:.:   .|..
Zfish   444 ---------DGRTRPNPFGSIPFGFGVRACVGRRIAELEMHLALARLIKLFEMRPDPTVGEVKAN 499

  Fly   515 FRSALINLPNIPLKFKFTD 533
            |||.|:  ||..:...|.:
Zfish   500 FRSVLV--PNKKVNLHFVE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a5NP_650782.1 p450 81..531 CDD:278495 130/465 (28%)
cyp27a1.4NP_001315442.1 p450 66..505 CDD:278495 131/477 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 1 0.900 - - OOG6_100895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.780

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