DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12a5 and cyp26c1

DIOPT Version :9

Sequence 1:NP_650782.1 Gene:Cyp12a5 / 42293 FlyBaseID:FBgn0038680 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:645 Identity:116/645 - (17%)
Similarity:203/645 - (31%) Gaps:272/645 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IVFSASQQRWQTNVPTAEIRND----PEWLQAKPFEEIPKANILSLFAKS---ALPGGKYKNLEM 74
            ::.:||.|.|.....:...|..    |:.....||           |.::   .:.|..:.:   
 Frog    24 LLLAASHQLWSLRWHSTRDRGSSLPLPKGSMGWPF-----------FGETLHWLVQGSSFHS--- 74

  Fly    75 MEMIDALRQDYGNI----------IFLPG-------MMGRDGLVMTHNPKDFEVVFRNEGVWPFR 122
                 :.|:.||||          |.:.|       ::|...||.|..|:..:::.         
 Frog    75 -----SRREKYGNIFKTHLLGKPVIRVTGAENIRKILLGEHHLVSTQWPQSTQIIL--------- 125

  Fly   123 PGSDILRYHRTVYRKDFFDGVQGIIPSQGKSWGDFRSIVNPVLMQPKNVRLYFKKMSQVNQEFVE 187
             ||:.|                      ..|.|:..             |...|.||:|      
 Frog   126 -GSNTL----------------------SNSIGELH-------------RQKRKMMSKV------ 148

  Fly   188 LIKEIRDASTQEVPGNFLETINRWTLES-------VSVVALDKQ----------LGLLRESGKNS 235
                :..|:.:.......|.: ||.:.|       ||:::..|.          |||.....:..
 Frog   149 ----LSSAALESYLPRIHEAV-RWEVRSWCRGVGPVSMLSCAKALTFRIAARILLGLSLTDTQFQ 208

  Fly   236 EATKLFKYLDEFFLHSADLEMKPSLWRYFKTPL------LKKMLRTMDSVQEVTLKYVDEAI-ER 293
            |.|:.|:.|.|               ..|..||      |:|.::..|::.:    |::||| |:
 Frog   209 ELTRTFEQLVE---------------NLFCLPLDIPFSGLRKGMKARDTLHQ----YMEEAIKEK 254

  Fly   294 LEKEAKEGVVRPEHEQSVLEKLL--------KVDKKVATVMAMDMLMAGVDTTSSTFTALLLCLA 350
            |.|.      .|:..:..|:.|:        :::.:.....|::::.|...||:|..|:|:|.|.
 Frog   255 LSKR------DPDACEDALDYLINSAKEGGKEINMQELKESAIELIFAAFLTTASASTSLVLLLL 313

  Fly   351 KNPEKQARLREEV---------------------------------------------------- 363
            |:|....::|:|:                                                    
 Frog   314 KHPSAIHKIRQELASHGLSEHCEQCLPATENPNNNILQDNGHQCLTAGCQLPLVMGTEGQVKTLW 378

  Fly   364 --------------------MKVLPNKDSEFTEA------------------------------- 377
                                .|.|.|.::...||                               
 Frog   379 EQTKQLLTDRTDQDPQNSLSSKNLVNGENRIQEAPCSHDKSNCSPVPGKLQNSVFEGTCQQNISL 443

  Fly   378 -SMKNVPYLRACIKESQRVYPLVIGNARGLTRDSVISGYRVPAGTIVSMIPINSLY-SEEYFPKP 440
             .:|::.||...:||..|:.|.|.|..|...:...:.||::|.|..| |..|...: :...:...
 Frog   444 EKLKSLHYLDCVVKEVLRLLPPVSGGYRTALQTFELDGYQIPKGWSV-MYSIRDTHETAAVYQNA 507

  Fly   441 TEFLPERWLRNASDSAGKCPANDLKTKNPFVFLPFGFGPRMCVGKRIVEMELELGTARLI 500
            ..|.|||:  :.....||.        ..|.::|||.|.|.|:||.:.::.|::....|:
 Frog   508 EMFDPERF--STERDEGKL--------GRFNYIPFGGGARSCIGKELAQIILKILAMELV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a5NP_650782.1 p450 81..531 CDD:278495 106/574 (18%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:425388 108/599 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574756at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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