DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynD and Atp5pdl1

DIOPT Version :10

Sequence 1:NP_524402.1 Gene:ATPsynD / 42291 FlyBaseID:FBgn0016120 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_017450045.2 Gene:Atp5pdl1 / 688022 RGDID:1593640 Length:151 Species:Rattus norvegicus


Alignment Length:151 Identity:52/151 - (34%)
Similarity:83/151 - (54%) Gaps:0/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
            ||..:.|..:|.|.:..|.:..|||:.....|:.::.:...:.:..|.||..|||.||.....||
  Rat     1 MARHKFALKTIGWVSFVEIISQNQKTIGNTLKSWNETFHTRLASLSEEPPATDWAYYKANGAKAG 65

  Fly    66 LVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASEQRIQNYQKEIAHLKSLLPYDQ 130
            |.|.|.|::.|||:|.|:||.::.||.|.:........:....:.|||.|:|::..:||::|:||
  Rat    66 LADDFAKKFNALKIPVPEDKYTALVDTEEREGVKNCAQFVSGFQARIQEYEKQLEKIKSMIPFDQ 130

  Fly   131 MTMEDYRDAFPDSALDPLNKP 151
            ||.:|..:.||::.||....|
  Rat   131 MTPDDLNEIFPETKLDKKKYP 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynDNP_524402.1 Mt_ATP-synt_D 3..156 CDD:461764 50/149 (34%)
Atp5pdl1XP_017450045.2 Mt_ATP-synt_D 5..151 CDD:461764 49/145 (34%)

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