DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynD and Atp5pd

DIOPT Version :10

Sequence 1:NP_524402.1 Gene:ATPsynD / 42291 FlyBaseID:FBgn0016120 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_062256.1 Gene:Atp5pd / 641434 RGDID:620083 Length:161 Species:Rattus norvegicus


Alignment Length:162 Identity:61/162 - (37%)
Similarity:100/162 - (61%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
            ||.|::|..:|:|.:..|.:|.|||:...|.|:.::.:...:.:..|.||.||||.|:..|...|
  Rat     1 MAGRKLALKTIDWVSFVEIMPQNQKAIGNALKSWNETFHTRLASLSEKPPAIDWAYYRANVDKPG 65

  Fly    66 LVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASEQRIQNYQKEIAHLKSLLPYDQ 130
            |||.|:.:|.|||:|.|:||.::.||||.|........:...|:.|::.|:|::..:|:::|:||
  Rat    66 LVDDFKNKYNALKIPVPEDKYTALVDAEEKEDVKNCAQFVTGSQARVREYEKQLEKIKNMIPFDQ 130

  Fly   131 MTMEDYRDAFPDSALDPLNKPTFWPHTPEEQV 162
            ||::|..:.||::.||....| :|||.|.|.:
  Rat   131 MTIDDLNEVFPETKLDKRKYP-YWPHQPIENL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynDNP_524402.1 Mt_ATP-synt_D 3..156 CDD:461764 55/152 (36%)
Atp5pdNP_062256.1 Mt_ATP-synt_D 3..155 CDD:461764 55/152 (36%)

Return to query results.
Submit another query.