DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynD and atp5pd

DIOPT Version :9

Sequence 1:NP_001287401.1 Gene:ATPsynD / 42291 FlyBaseID:FBgn0016120 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001011021.1 Gene:atp5pd / 496430 XenbaseID:XB-GENE-993879 Length:161 Species:Xenopus tropicalis


Alignment Length:158 Identity:65/158 - (41%)
Similarity:100/158 - (63%) Gaps:1/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
            ||.||.|..:|:|.|.|||||.|||:.|.|.||:||.....:.:.||..|.||||.|:..|..||
 Frog     1 MAGRRAALKAIDWMAFAERVPPNQKAMFNALKTRSDTVAGKLASLPEKTPVIDWAFYRTAVQKAG 65

  Fly    66 LVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASEQRIQNYQKEIAHLKSLLPYDQ 130
            :||.|:|::.|..:|.|:|..:.:::|:.:.|..:...|.:.|:.|:..|:||:...::::|:||
 Frog    66 MVDEFEKKFNATTIPEPKDTQTEKINAQEQESVKQAATYIQESKTRVSQYEKELERYRNMIPFDQ 130

  Fly   131 MTMEDYRDAFPDSALDPLNKPTFWPHTP 158
            ||.:|..:|||::.||. .|..:|||.|
 Frog   131 MTFDDLHEAFPETRLDK-EKHVYWPHKP 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynDNP_001287401.1 Mt_ATP-synt_D 11..160 CDD:283519 60/148 (41%)
atp5pdNP_001011021.1 Mt_ATP-synt_D 3..155 CDD:368646 60/152 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4946
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H130552
Inparanoid 1 1.050 141 1.000 Inparanoid score I4384
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1299717at2759
OrthoFinder 1 1.000 - - FOG0003635
OrthoInspector 1 1.000 - - oto103504
Panther 1 1.100 - - LDO PTHR12700
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2043
SonicParanoid 1 1.000 - - X6072
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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