DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL55 and zgc:171480

DIOPT Version :10

Sequence 1:NP_650780.1 Gene:mRpL55 / 42290 FlyBaseID:FBgn0038678 Length:107 Species:Drosophila melanogaster
Sequence 2:NP_001104649.1 Gene:zgc:171480 / 564733 ZFINID:ZDB-GENE-080204-83 Length:133 Species:Danio rerio


Alignment Length:114 Identity:52/114 - (45%)
Similarity:76/114 - (66%) Gaps:14/114 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QAVQQIRCISSAT-------------TAVTRLHRSVYCRLYPTVVVQPDGSTINIRYHEPRKIIK 59
            |||...||:.:.:             |:|.||.|..|.|:||.::|:||||||||||.||||::|
Zfish    20 QAVFTHRCLQATSSFHSTVIQSDSNRTSVVRLGRQKYERMYPVLLVRPDGSTINIRYQEPRKLMK 84

  Fly    60 LPLDLSTLTDAERRARLEARKPRKKV-KIMEEVEDNFNAKKYMKYIKKK 107
            :|:||:||::.||:.|:..|:|:|.| |.:|:.:|:|.|..|.|:.|||
Zfish    85 MPVDLTTLSEMERKIRMRKREPKKAVKKELEDFDDDFKADDYSKFWKKK 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL55NP_650780.1 Mitoc_L55 <18..96 CDD:462893 40/91 (44%)
zgc:171480NP_001104649.1 Mitoc_L55 26..132 CDD:462893 46/105 (44%)

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