DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cdi and wnd

DIOPT Version :9

Sequence 1:NP_524401.2 Gene:cdi / 42289 FlyBaseID:FBgn0004876 Length:1213 Species:Drosophila melanogaster
Sequence 2:NP_649137.3 Gene:wnd / 40143 FlyBaseID:FBgn0036896 Length:977 Species:Drosophila melanogaster


Alignment Length:1260 Identity:247/1260 - (19%)
Similarity:389/1260 - (30%) Gaps:449/1260 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QHSGPGPPSEICGLSVDQVDSSAASPFIWPSTAGMCTTATTVTTSTNGDATAEAPVKHQ------ 63
            :|.|..|     .||:||.|:...|........|....|.|.....:.|..:...::|.      
  Fly    31 RHHGSSP-----NLSLDQTDNLRRSMACLQDEFGHLGIAATDLPFKSSDLDSPPRLQHHNNYAEI 90

  Fly    64 -------------PLHNG-------------GWIGNGLPPA--PVTRTISSDRLVTGSSCRALRT 100
                         |.|.|             ||: .||...  ||...|....::...|.|:...
  Fly    91 TDSSAENTCQQRWPPHVGGAGAAFGHPDKPIGWM-YGLLGCMKPVLSFIGKTGVIEVKSQRSEDW 154

  Fly   101 AVSALYSVDDFVKEKIGSGFFSEVY--KVTHRTTGQVMVLKMNQLRANRPNMLREVQLLNKLSHA 163
            .: ...|:.:.  |.:|||....|:  ::.:.|   |.|.|:.:|:..      :::.|.||.|.
  Fly   155 QI-PFESITEL--EWLGSGAQGAVFSGRLKNET---VAVKKVKELKET------DIKHLRKLDHE 207

  Fly   164 NILSFMGVCVQEGQLHALTEYINGGSLEQLLANKEVVLSATQKIRLALGIARGMSYVHDAGIFHR 228
            ||:.|.|||.|......:.|:...|.|:.:|..::|:| .::.:..:..||.||.|:|...|.||
  Fly   208 NIIKFKGVCTQSPVFCIIMEFCPYGPLQNILKEEQVML-PSRLVSWSKQIALGMQYLHSHKIIHR 271

  Fly   229 DLTSKNVLIRNLANDQYEAV-VGDFGLAAKIPVKSRKSRLETVGSPYWVSPECLKGQWYDQTSDV 292
            ||.|.|:||     ...|.| :.|||.:.:....|.|  :...|:..|::||.::.:...:..|:
  Fly   272 DLKSPNILI-----STNEVVKISDFGTSREWNEISTK--MSFAGTVAWMAPEVIRNEPCSEKVDI 329

  Fly   293 FSFGIIQCEIIARIEADPDMMPRTASFGLDYLAFVELCPMDTPPVFLRLAFYCCLYDAKSRPTFH 357
            :|:|::..|::.......|:......:|:...:...|.|...|..|..|...|.....::||:|.
  Fly   330 WSYGVVLWEMLTCEIPYKDVDSSAIIWGVGNNSLKLLVPSTCPEGFKLLVKLCWKSKPRNRPSFR 394

  Fly   358 DATKKLTL----LLEK-----YEHESSAGASPLSSLELINCSPGGSDSENVTLTPRASVPTVATI 413
            .....|.:    ||.|     :|.:.|......|.|:.|..:..........|..|.        
  Fly   395 QILSHLDIAGPELLRKTEKQYFETQKSWKEEVRSHLKEITQNGTNIHKYEQDLIKRR-------- 451

  Fly   414 CTAPAGTLTPRHLQEVDEDGFRFPSKKSASAALPGTPNGSAGSSGFDDHILK--------SRVRR 470
                  |...||.|::                          ...::|.:.|        |....
  Fly   452 ------TAEWRHAQDI--------------------------RMVYEDKLQKTNQLFFELSECMS 484

  Fly   471 ATQKLEAEILLHRRSLS--------------ENIIHFPMHTSPSDKARCHQMQRQRSSTHSPTPP 521
            ..|:.|.||....|.|.              ..:.|:....:|:..|    :|:|.::....|.|
  Fly   485 QLQEKEKEIAERERKLPGSGYKPNRRFGNTIRKMQHYRRRLNPAPAA----IQQQSTTPDPETTP 545

  Fly   522 R---------QLSSVQLP----ATSIPDP---PPLPKPVPAVLTLRKVGD------PQYKPTSEK 564
            .         ||.|...|    |..||..   .|:|.....|...|:...      |:|.||.::
  Fly   546 ESPVKCMLYAQLDSNCQPKSYLANIIPSSGLGAPMPNKNKKVFRHRRNASGSFGAPPKYSPTRDR 610

  Fly   565 DHNGSKPNPFEALAQLRGVKKILDANPKTYAAGVGDLFSSCFEMLAPFFKELAAMQSKAGAQGGG 629
            .:.....|           :|:                            :|...|::..|.   
  Fly   611 RYQSEPEN-----------RKV----------------------------QLVERQTQTDAM--- 633

  Fly   630 TSTEETSTGNKASAATP-SEPKSLPVSPHMTRKYSAIELRLPQRISNAAPPAVTSAPPPSIALPT 693
               :.:.|....||..| |:|..:||..|   :...::|:..|:|:.|...|             
  Fly   634 ---DVSETDISPSAEAPRSQPIDVPVPNH---RQLPLQLQRVQKIAQAQARA------------- 679

  Fly   694 DEDDCDDCNSEGEDPDGGGNCADAESSSDDSAVRPSTVPTARKYRANSLYAHPLFRGSNGTSMKS 758
                                 ....:||...||.|               |.|    |||.|:  
  Fly   680 ---------------------RSGSTSSAAGAVNP---------------ACP----SNGNSL-- 702

  Fly   759 TSTGEFESPTLLKASASTITLTASVGATNSCEDLTESARKSKEQASSGATAAVQALPTPMSGCST 823
             ||.|.   |...|.:|...|...|..:|...|:||                          |  
  Fly   703 -STSEL---TYQDACSSPDQLIDDVMNSNERLDMTE--------------------------C-- 735

  Fly   824 RLVETPVSVSSCTDLELDELKNTCDLNELKNSCEQLPLKTNLTR--RDSIESGFFSCFNEESDAA 886
                       |:|.|                        ||.|  |..||      |..|:..:
  Fly   736 -----------CSDNE------------------------NLERLGRKVIE------FINENRLS 759

  Fly   887 ITNNSFGRQLNGIGSLGFGCGG--------GGNSSNCCYEKLKTQLMLDACVSADSEINDKLASL 943
            |.:|:     |.:.:...|.||        .|||               .|:|            
  Fly   760 IQSNT-----NSVSNADNGNGGASPLELRESGNS---------------PCLS------------ 792

  Fly   944 CRCCYYATSTSNAAVTAAAAAAQQQQQSHLLNDTSSTSSSVLLIDNDPAVIGGNTSSSTALDSMD 1008
             ||                ::...:::.|.|.|..:.||           ||.....|...||..
  Fly   793 -RC----------------SSTHSKRRKHPLGDNPNGSS-----------IGNANGESHEQDSWS 829

  Fly  1009 DLDADIVASRRTHQRRYTCHHALLSGNGSESQMAATASLINRLAL---------DSEIHTL-LQR 1063
            |.:.:....:...:||......:  ..|...:.:..|.|..::|:         |.|.:|. ...
  Fly   830 DEEGETTDYKYALRRRSIGRQPI--ARGMRPRRSYKAPLSQKIAIHKRNVVIVSDEEENTSEYSH 892

  Fly  1064 SPFATNQLLYCKNRTSSIYTDSSDDISSLAGSDSLLWDDRSFTALPSTRSAQIAKIVEYFERKRQ 1128
            ||.:.:..|           :|:.||:           |...|...||.|...:        :.:
  Fly   893 SPSSQHSTL-----------ESNTDIA-----------DMKKTQATSTSSNSYS--------EPE 927

  Fly  1129 DSSPPSVHHRNGNGTVAAAVAASAL 1153
            |.|..|.....||....|.....||
  Fly   928 DDSSDSSDEEQGNRPTEAKAEGPAL 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdiNP_524401.2 TyrKc 113..363 CDD:197581 68/252 (27%)
PKc_like 116..370 CDD:304357 71/265 (27%)
wndNP_649137.3 STYKc 161..400 CDD:214568 68/257 (26%)
STKc_MAP3K12_13 167..403 CDD:270961 68/252 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445251
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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