DRSC/TRiP Functional Genomics Resources

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Protein Alignment cdi and LIMK2

DIOPT Version :10

Sequence 1:NP_524401.2 Gene:cdi / 42289 FlyBaseID:FBgn0004876 Length:1213 Species:Drosophila melanogaster
Sequence 2:NP_001026971.1 Gene:LIMK2 / 3985 HGNCID:6614 Length:686 Species:Homo sapiens


Alignment Length:342 Identity:126/342 - (36%)
Similarity:179/342 - (52%) Gaps:35/342 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AGMCTTATTVTTSTNGDATAEAPVKHQPLHNGGWIGNGL-PPAPVTRTISSDRLVTGSSCRALRT 100
            ||.....:|:.|..|    .|..::.:.|.....|.... |.:|....:.|..:....|.|...:
Human   239 AGHPHALSTLDTKEN----LEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS 299

  Fly   101 AVSALYSVDDFVK-EKIGSGFFSEVYKVTHRTTGQVMVLKMNQLRAN---RPNMLREVQLLNKLS 161
            ....::...|.:. |.:|.|||.:..||||:.||:|||:| ..:|.:   :...|.||:::..|.
Human   300 YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMK-ELIRCDEETQKTFLTEVKVMRSLD 363

  Fly   162 HANILSFMGVCVQEGQLHALTEYINGGSLEQLLANKEVVLSATQKIRLALGIARGMSYVHDAGIF 226
            |.|:|.|:||..::.:|:.|||||.||:|:..|.:.: .....||:|.|.|||.||:|:|...|.
Human   364 HPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMD-PFPWQQKVRFAKGIASGMAYLHSMCII 427

  Fly   227 HRDLTSKNVLIRNLANDQYEAVVGDFGLAAKI-------PVK------------SRKSRLETVGS 272
            ||||.|.|.||:.    ....||.||||:..|       |::            .||.|...||:
Human   428 HRDLNSHNCLIKL----DKTVVVADFGLSRLIVEERKRAPMEKATTKKRTLRKNDRKKRYTVVGN 488

  Fly   273 PYWVSPECLKGQWYDQTSDVFSFGIIQCEIIARIEADPDMMPRTASFGLDYLAFVE-LCPMDTPP 336
            |||::||.|.|:.||:|.|:|||||:.||||.::.||||.:|||..|||:...|.| ..|.|.||
Human   489 PYWMAPEMLNGKSYDETVDIFSFGIVLCEIIGQVYADPDCLPRTLDFGLNVKLFWEKFVPTDCPP 553

  Fly   337 VFLRLAFYCCLYDAKSR 353
            .|..||..||..:.:||
Human   554 AFFPLAAICCRLEPESR 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdiNP_524401.2 Protein Kinases, catalytic domain 116..370 CDD:473864 111/261 (43%)
LIMK2NP_001026971.1 LIM <15..44 CDD:413332
LIM2_LIMK2 46..104 CDD:188849
PDZ_LIMK-like 126..218 CDD:467236
Protein Kinases, catalytic domain 316..570 CDD:473864 109/259 (42%)
PP1_inhibitor 564..686 CDD:461630 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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