DRSC/TRiP Functional Genomics Resources

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Protein Alignment cdi and LIMK1

DIOPT Version :10

Sequence 1:NP_524401.2 Gene:cdi / 42289 FlyBaseID:FBgn0004876 Length:1213 Species:Drosophila melanogaster
Sequence 2:XP_061512285.1 Gene:LIMK1 / 1280929 VectorBaseID:AGAMI1_012953 Length:1526 Species:Anopheles gambiae


Alignment Length:231 Identity:51/231 - (22%)
Similarity:76/231 - (32%) Gaps:61/231 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PPLPTMSSGGS--RFKQSESPINMLITHREMKCDMKSEPSLKVVPVETRDPYFSPNGKHAIAKPT 169
            ||.|....|.|  :...|.|.|...:.:..:...:.|..|      .|..|.:..|.       |
Mosquito    85 PPPPPHRGGTSPGKLSGSHSAIRSQLENMHIGGSVMSSNS------STATPSYQSNS-------T 136

  Fly   170 AAIKNIHPSSSPSVVQPTSGIPVQQRPASHLIAPNPKPVYTVPK--VAPTAQVKASTIIQPTVNG 232
            ::..:..|.:.|.|.:.|..||....||  :..|     |.:.|  .|||...:....|..||..
Mosquito   137 SSYSSSAPVAPPPVPRHTQSIPSYSAPA--ISTP-----YGIAKFDYAPTQSDEMGLRIGDTVLI 194

  Fly   233 QVKVSSETQISTGVMVAEANQSRRT----------------KSVAASPP-----------AHNVL 270
            ..||.:|       .....||::||                ::..|.||           .:...
Mosquito   195 SKKVDAE-------WFYGENQNQRTFGIVPSSYLDIKIPLKEAFTALPPRPAAPSGSSSGTYATA 252

  Fly   271 NIDNKIEQAMDL---VKTHLMFAVREEVDGLRGKIF 303
            ..|....:|.||   |.:.:|...|...:.|.|:.|
Mosquito   253 IYDYNSNEAGDLNFAVGSQIMVTARVNEEWLEGECF 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdiNP_524401.2 Protein Kinases, catalytic domain 116..370 CDD:473864 47/222 (21%)
LIMK1XP_061512285.1 None

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