DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Cnga4

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_445948.2 Gene:Cnga4 / 85258 RGDID:619844 Length:575 Species:Rattus norvegicus


Alignment Length:42 Identity:14/42 - (33%)
Similarity:20/42 - (47%) Gaps:8/42 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1129 GEIQVTADNDPQEAEASKLSQQKLDPSGMY-------VVFPM 1163
            |:::.|....|...:|.|. ...|||||.|       :|||:
  Rat     5 GKVKTTESTPPAPTKARKW-LPVLDPSGDYYYWWLNTMVFPI 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Cnga4NP_445948.2 Ion_trans 34..273 CDD:459842 3/12 (25%)
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:P29973 164..272
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P29973 231..234
C-linker. /evidence=ECO:0000250|UniProtKB:P29973 274..350
IQ-type. /evidence=ECO:0000250 292..302
CAP_ED 348..464 CDD:237999
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:P29973 354..474
CLZ 464..534 CDD:465160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..575
Blue background indicates that the domain is not in the aligned region.

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