DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Cnga3

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_001385615.1 Gene:Cnga3 / 85257 RGDID:70948 Length:670 Species:Rattus norvegicus


Alignment Length:162 Identity:33/162 - (20%)
Similarity:52/162 - (32%) Gaps:54/162 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 QQHQPLPPTLQQQPSPPKPPMTLSDIFNSLA-------EEESNVAQNYQQNQG---------FDA 537
            |..||.|..|..:.:..:   .|..:.|.|.       |..|.|.|......|         |.:
  Rat     7 QCSQPSPRQLSVKDAADR---DLDQVENGLGRSHSPCEETSSTVHQGIVMETGELAGAAQSLFTS 68

  Fly   538 QGNLIQPIAPSKPSPFAMQQPGTQQQPGTQQPAPHQRPSPN---------EQKVISGSQENYSNE 593
            ||       |::.|.|.:     ..:....:...|:.|:|:         |.|.:|..:.|    
  Rat    69 QG-------PARVSRFII-----SIRAWAARHLHHEDPTPDSFLDRFHGAELKEVSSQERN---- 117

  Fly   594 YVSYQVQQPNMMQYRPVPG----QINNVVISP 621
                  .|||.....|..|    :.:.:|:.|
  Rat   118 ------AQPNPGGQEPPEGGKGRKKDPIVVDP 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Cnga3NP_001385615.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..138 7/36 (19%)
Ion_trans 148..390 CDD:459842
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:P29973 278..386
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P29973 345..348
C-linker. /evidence=ECO:0000250|UniProtKB:P29973 388..464
CAP_ED 462..578 CDD:237999
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:P29973 468..588
CLZ 578..647 CDD:465160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 644..670
Blue background indicates that the domain is not in the aligned region.

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