DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Hcn1

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_445827.2 Gene:Hcn1 / 84390 RGDID:620688 Length:902 Species:Rattus norvegicus


Alignment Length:607 Identity:124/607 - (20%)
Similarity:190/607 - (31%) Gaps:241/607 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ALLPLEARSADVSGEEDVISTSYVLPNQIFNEGKPYYARQDPVSGQLDFSAKKPAGIQPEANEVL 98
            |.:||.| :||.:....::|.   |..::|..| .|..|:..|..::.|.....||:      :.
  Rat   460 ATMPLFA-NADPNFVTAMLSK---LRFEVFQPG-DYIIREGAVGKKMYFIQHGVAGV------IT 513

  Fly    99 DPNEKIVLSGGS--------------------------SPNIHDFLNLPVKYSSSKFVYPLVS-- 135
            ..::::.|:.||                          |.::.:|..:..:|...:..:..|:  
  Rat   514 KSSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 578

  Fly   136 --------SSYANLKYQGSNKNYITNKKPTSVVAPVTP---------PPPNYHSSNFFTVPTTKL 183
                    :|....|:|......:.|.:...::..:..         ||.||          .::
  Rat   579 RLDRIGKKNSILLQKFQKDLNTGVFNNQENEILKQIVKHDREMVQAIPPINY----------PQM 633

  Fly   184 TAVTPTAGAYYPSSPSTSTSTTTSTSTTTTTTTTTRGTLPPSRKPVTTTTTTAPTSPAAKYTTTS 248
            ||:                   ..||:|||.|:..|...||                  .||.||
  Rat   634 TAL-------------------NCTSSTTTPTSRMRTQSPP------------------VYTATS 661

  Fly   249 RRPIPLQTVSTTPQPPRTSTTRKKFVPTKKYSPTVPSTSGRPTVGHEDQRPVKSSPRPTPSSSDV 313
            .....|.:.|.:.|.|:                                                
  Rat   662 LSHSNLHSPSPSTQTPQ------------------------------------------------ 678

  Fly   314 ALTTHHATPQAAIFPTEPVTTTKMYTTSSTSAPVVFTEGPTPPPAFSPIPGTGIPNLDPADVYHT 378
                    |.|.:.|..       |||:..|           ||..||:.........|     |
  Rat   679 --------PSAILSPCS-------YTTAVCS-----------PPIQSPLATRTFHYASP-----T 712

  Fly   379 LGQKNTQAEEQQQLQLEKQQQMQKQQQIQHQQYQEQQQQQLYEQQQYQLQLEKQHLDKQKHPYQQ 443
            ..|.:...:.|.|||..:.||.|.|.|.|.||.|:|||||                       ||
  Rat   713 ASQLSLMQQPQPQLQQSQVQQTQPQPQPQPQQPQQQQQQQ-----------------------QQ 754

  Fly   444 QLEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQHQQQH---IQQQHQHQQQHQPLPP----TLQQQ 501
            |   |||||||||||..|.......:.:.|:..|..|   :.::.:.....||..|    |:..:
  Rat   755 Q---QQQQQQQQQQQQPQTPGSSTPKNEVHKSTQALHNTNLTREVRPLSASQPSLPHEVSTMISR 816

  Fly   502 PSP---------PKPPMTLSDIFNSLAEEESNVAQNY----QQNQGFDAQGNLIQP---IAPSKP 550
            |.|         |:|..|:... ...|...|.|.|..    |.:.|      .|.|   :.|:.|
  Rat   817 PHPTVGESLASIPQPMATVHST-GLQAGSRSTVPQRVTLFRQMSSG------AIPPNRGVPPAPP 874

  Fly   551 SPFAMQQPG---TQQQPGTQQP 569
            .|.|:|:..   ..:.|..::|
  Rat   875 PPAAVQRESPSVLNKDPDAEKP 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Hcn1NP_445827.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75
Ion_trans_N 87..129 CDD:400630
PLN03192 122..>609 CDD:215625 27/159 (17%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:O60741 347..351
CAP_ED 464..572 CDD:237999 20/118 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..681 20/139 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 713..824 43/136 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 858..902 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.

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