DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and kcnh2a

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:XP_073775577.1 Gene:kcnh2a / 563802 ZFINID:ZDB-GENE-070912-699 Length:1254 Species:Danio rerio


Alignment Length:283 Identity:60/283 - (21%)
Similarity:94/283 - (33%) Gaps:79/283 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 EQPSHSYPPQQSSTPQKPQPTPPVL--------MQGEDTKELLVSTNIRFPAQGEESLEPPSSAV 801
            |.||||     .|.|....|:..||        .:.|:..|::.....|.    |:.:.....|:
Zfish  1015 EVPSHS-----MSFPSSSVPSNTVLHNVTYGQCSEVENRLEMMHRQLYRL----EKRMSKDIGAI 1070

  Fly   802 M--------QGPPAGPNING--HAQPL----SLQQIQNSNPVVFPKP--MDEVVP--GSASVQIQ 848
            |        |.|||..::..  .|.|:    ..:.:|..||:....|  :.|::.  ..|...|:
Zfish  1071 MQLLQRQMVQVPPAYSSVTSPTEASPIPPKPGQKLVQPVNPLETETPSILSEILDPHDFADSPIK 1135

  Fly   849 QHEVLNLSQQKQPLKFPAQQPGEQPSLEMEPPPRYPTTVPVAHAPPTPGKRPLGTSPPSNFYNEY 913
            ..|.|:.:.:.|.|...:|.|.|.||                                ..:...:
Zfish  1136 ASESLSGAMELQLLDCSSQPPSENPS--------------------------------GAYMGRW 1168

  Fly   914 NRKPQNGPRPSNLPNILPQFRPNAKISSGHPPALKQEP-GNIRLPQQGGPGPKRPYNPAMQPQFA 977
            :|...:....:..|......:..|.....|...|..|| |.:|.||       ...:..::....
Zfish  1169 SRSVSHHTNTTGDPTAHIHLQQTAIADQAHYSFLDAEPIGTLRQPQ-------AVQSLHLETSEC 1226

  Fly   978 HRRQPLHQQHQQ----MMQKRYP 996
            .|||.|..:||.    .||||:|
Zfish  1227 SRRQSLPVKHQVEDDCSMQKRHP 1249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 35/201 (17%)
kcnh2aXP_073775577.1 None

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