DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and sei

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster


Alignment Length:153 Identity:37/153 - (24%)
Similarity:53/153 - (34%) Gaps:38/153 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PLEARSADVSGEEDVISTSYVLPNQIFNEG-KPYYARQDPVSG-----QLDFSAKKPAGIQPEAN 95
            ||...:||:.......|...:..|..:|:. ||    .|.|.|     .||..|...:..:|:..
  Fly   224 PLRKNNADLFQTHKGTSYECMFKNLKYNQAEKP----TDNVMGNSYDDMLDKEALLGSKSEPKGQ 284

  Fly    96 EVLDPNEKIVLSGGS-------SPNIHDFLNLPVKYSSSKFV----------YPLVSSSY----- 138
               |||:.|...||:       ..|.:....| :.||..|.|          |..:.:.|     
  Fly   285 ---DPNDMITSLGGNILLDQKLQNNYYHKWTL-LHYSPFKAVWDWIILILVMYTAIFTPYVAAFL 345

  Fly   139 -ANLKYQGSNKNYITNKKPTSVV 160
             ....||..|..|| |..|..::
  Fly   346 LGEQDYQRRNSKYI-NSDPIVII 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
seiNP_476713.1 Ion_trans 322..583 CDD:459842 10/47 (21%)
CAP_ED 657..767 CDD:237999
Blue background indicates that the domain is not in the aligned region.

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