DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and KCNH2

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:XP_047276304.1 Gene:KCNH2 / 3757 HGNCID:6251 Length:1185 Species:Homo sapiens


Alignment Length:441 Identity:92/441 - (20%)
Similarity:134/441 - (30%) Gaps:161/441 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 VLGSQVQQVSVGHPSIEKEPLFAKDTPGVQYGQV---INEDIGNIKR-PLKEPLPPPPNFQQ--M 687
            :|...|....:|...|..|||.....||...|.|   ...|:..|.| .|.|.|...|.|..  .
Human   815 ILRGDVVVAILGKNDIFGEPLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPEFSDHFW 879

  Fly   688 PSIQQNSNFHQNGNVATSGAPGT--------------ISYQEPPPEAPTPYQQLPLIG------- 731
            .|::...|......:  .|:||:              :|::....:......::..:|       
Human   880 SSLEITFNLRDTNMI--PGSPGSTELEGGFSRQRKRKLSFRRRTDKDTEQPGEVSALGPGRAGAG 942

  Fly   732 --SNKRP----SKKPVTKPEQP--SHSYPPQQSSTPQK----PQPTPPVLMQGEDTKELLVSTNI 784
              |..||    .:.|.:.|..|  |....|.:||:|.:    ..|.||                 
Human   943 PSSRGRPGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVPFSSPRPP----------------- 990

  Fly   785 RFPAQGEESLEPPSSAVMQGPPAGPNINGHAQPLSLQQIQNSNPVVFPKPMDEVVPGSASV---- 845
                 ||             ||.|       :|| ::..:.|:...  .|:.....|.:::    
Human   991 -----GE-------------PPGG-------EPL-MEDCEKSSDTC--NPLSGAFSGVSNIFSFW 1027

  Fly   846 ---QIQQHEVLNLSQQKQP--LKFPAQQPGEQPSLEMEPP------------------------- 880
               :.:|::.|.......|  |..|...||.:|..::|..                         
Human  1028 GDSRGRQYQELPRCPAPTPSLLNIPLSSPGRRPRGDVESRLDALQRQLNRLETRLSADMATVLQL 1092

  Fly   881 -PRYPTTVPVAH-APPTPGKRPLGTSP--PSNFYNEYNRKPQNGPRPSNLPNI-------LPQFR 934
             .|..|.||.|: |..|||..|..|||  |                .|.||.:       :.||.
Human  1093 LQRQMTLVPPAYSAVTTPGPGPTSTSPLLP----------------VSPLPTLTLDSLSQVSQFM 1141

  Fly   935 PNAKISSGHPPALKQEPGNIRLPQQGGPGPKRPYNPAMQPQFAHRRQPLHQ 985
            ...::..| .|.|.||....||...|..|             |...||||:
Human  1142 ACEELPPG-APELPQEGPTRRLSLPGQLG-------------ALTSQPLHR 1178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 45/227 (20%)
KCNH2XP_047276304.1 PAS_9 64..156 CDD:463873
Ion_trans 435..694 CDD:459842
CAP_ED 768..879 CDD:237999 19/63 (30%)
Blue background indicates that the domain is not in the aligned region.

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