Protein Alignment CG6026 and Elk

DIOPT Version :10

• Sequence 1: NP_650778.2
• Gene: CG6026 / 42287
• FlyBaseID: FBgn0038676
• Length: 1555
• Species: Drosophila melanogaster
• Sequence 2: NP_477009.1
• Gene: Elk / 37047
• FlyBaseID: FBgn0011589
• Length: 1284
• Species: Drosophila melanogaster
• Alignment Length: 700
• Identity: 144/700 - (20%)
• Similarity: 241/700 - (34%)
• Gaps: 232/700 - (33%)

  Fly   910 YNEYNRKPQNGPRPSNLPNILPQF-RPNAKISSGHP-PALKQEPGNIRLPQQGGPGPKRPYNPAM 972
            |.||.::..|..:.....|:...: ..::.|....| |::.::..|....::||.|.|.  |...
  Fly   707 YPEYQQQFANDIQHDLTCNLREGYENQDSDIGPSFPLPSISEDDENREEAEEGGKGEKE--NGGG 769

  Fly   973 QPQFAHRRQPLHQ-QHQQMMQKRYPMNRISEYPVGPGPGGDVNRRVYRLPPYGGQNVPYMPDHMY 1036
            .|..|   .|||. .:..:...|.|:         .|.|...|:|::
  Fly   770 PPSGA---SPLHNISNSPLHATRSPL---------LGMGSPRNQRLH------------------ 804

  Fly  1037 PRRPQGAGPLRSVDGYPAERHAPSSEPYKTIDAEAAAD---FEEEDLVINDPPQPV--------- 1089
             :|.:....||..:    :||       :|::|..:.|   |||        |:|:
  Fly   805 -QRGRSLITLRETN----KRH-------RTLNAACSLDRGSFEE--------PEPLEEEQSSGGK 849

  Fly  1090 TPGKDRKGTEETKLEPVVTLQMLQSQKKAVSLPGDDTGAGEIQVTADNDPQEAEASKLSQQKLDP 1154
            .|..:|..::.:.|...|. |:....:.|:|      ...|:..|::      ..:..|..|..|
  Fly   850 RPSLERLDSQVSTLHQDVA-QLSAEVRNAIS------ALQEMTFTSN------AMTSHSSLKFPP 901

  Fly  1155 SGMYVVFPMKSAEKGQSEGDAPS--------APAEYQNTPFSVIRDQPQEPILKNKKPQSLQQQN 1211
            :..   .|..|...|...|.|..        |.||..    ::.|.....|.:..:..| |...|
  Fly   902 ARS---IPNISGVAGTRSGVAVEHGLMGGVLAAAELA----AMQRSSSHPPEVWGRDVQ-LPTSN 958

  Fly  1212 KAQHVPKDKFPYPIEKPDPSFSELHPESQTSV---------SGVLVAPRIITGAMGTGTETPIAI 1267
            .|    ..|.|.|:|   |..:.....|||..         ..||..||::.|.:|
  Fly   959 TA----SSKAPSPVE---PKKTMTSRSSQTDFYRIDFPTFERFVLANPRLVLGLLG--------- 1007

  Fly  1268 AYTPTEPNPFRHEQGQKFSNINLATSVINEIRQDTQTEEGLS-SDFDLRGQNFEKDFMAPFYPSV 1331
                .|| ..::|.........|..|.:|.|      :|.:| ||.:|
  Fly  1008 ----IEP-AIKNEMDLLQQKQTLQISPLNTI------DECVSPSDHNL----------------- 1044

  Fly  1332 SLGGASGAAAI--NPAAPSNWNILPSTTDQAIYEKNN----------INRADVETTEQKKPEEEQ 1384
                ||....:  :.|.|:...|.|...|    |.:|          .:.:..::|:.....|||
  Fly  1045 ----ASSKERLITSSAVPTPGRIYPPLDD----ENSNDFRWTMKHSASHHSCCKSTDALLSPEEQ 1101

  Fly  1385 PTASALTAE-KPSEMDSFQPQLQGGFKPIYPPGYKHVEQVEQEEIAGAKNAGKDQPIALPLMGTT 1448
            |..|.|..: .|:      |.:|                    |:..:|.:         |..:|
  Fly  1102 PPISILPVDATPA------PSVQ--------------------EVRSSKRS---------LRKST 1131

  Fly  1449 AKPSTSASPVSSSSSS---STSTSSTTSTTSTTHPPGVTKSDVTLATTKAPAISTKPTQR----- 1505
            :..::|.|..||||:|   |.||.:.|:|.::.|....::|..::|||:..:...:.::.
  Fly  1132 SGSNSSLSSSSSSSNSCLVSQSTGNLTTTNASVHCSNSSQSVASVATTRRASWKLQHSRSGEYRR 1196

  Fly  1506 -KKSTFETS--------LAALLFGDEDEEDGARKSAELPKAQVGPRNVPR 1546
             .::|.|.|        :|.:.:|.::||     |.||    :|||...|
  Fly  1197 LSEATAEYSPPAKTPLPVAGVSYGGDEEE-----SVEL----LGPRRNSR 1237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6026	NP_650778.2	PHA03378	<792..975	CDD:223065	14/66 (21%)
Elk	NP_477009.1	PAS_9	40..133	CDD:463873
		PLN03192	270..>650	CDD:215625
		cNMP	586..716	CDD:197516	3/8 (38%)