DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Ih

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster


Alignment Length:691 Identity:141/691 - (20%)
Similarity:222/691 - (32%) Gaps:187/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 NTQAEEQQQLQLEKQQQMQKQQQIQHQQYQEQQQQQLYEQQQY------QLQLEKQHLDKQKHPY 441
            |.|...:..|..:.|||.|::....||....|....|...|..      .:.|.:...|:|:||.
  Fly    21 NDQRASRDNLCPDNQQQQQQRHSHSHQHLVRQSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQ 85

  Fly   442 QQQLEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQHQQQHIQQQHQHQQQHQPLPPTLQQQPSPPK 506
            |..|     |||||||||.|||                  ||:|:............:|..|..:
  Fly    86 QPHL-----QQQQQQQQHLQQQ------------------QQRHRSSSSRLSTSGISKQNSSDSR 127

  Fly   507 PPMTLSDIFNS-LAEEESNVAQNYQQNQGFDA---------------QGNLI------QPIAPSK 549
            ..:.:.|..:| ::....:|:....|:..:||               ..:|:      |.:|.::
  Fly   128 SGLRILDSSHSPVSCGTQSVSSTGGQSALYDACHEYSRSLSAAAAEGAASLLKSHYSDQQLAQTE 192

  Fly   550 PSPFAMQQPGTQQQPGTQQPAPHQRPSPNEQKVISGSQENYSNEYVSYQVQQPNMMQYRPVPGQI 614
            |.|    :|..::.  ..:.....|....|::.::....|.|:|| .|.......:        :
  Fly   193 PDP----EPDPERD--RDRDRDRDRDRERERRHLTNLNLNLSSEY-DYSGSDKQQL--------V 242

  Fly   615 NNVVI------SPGQQSASFVLGSQVQQVSVGHPSIEKEPLFAKDTPGVQYGQVINEDIGNIKRP 673
            |...|      ||     ||:..:::::.|....::..:...||     :.||:|::.    ...
  Fly   243 NETYIFKCIANSP-----SFLRTNKIKEQSKKLRNLSLKTRTAK-----KKGQIISKS----NAV 293

  Fly   674 LKEPLPPPPNFQQM----------PSIQQNSNFHQNGNVATSGAPGTISYQ-EPPPEAP------ 721
            ....|.|...:..:          |.:...|:.....:...|.||.:.|.. ...|:.|      
  Fly   294 SDNSLHPGDKYLNLYLVEKKHSLQPQVASTSSSINTTHPQASSAPASSSSTCTKAPQLPALSAVA 358

  Fly   722 TPYQQLPLIGSNK--------------RPSKKPVTKPEQ---PSHSYPPQQSSTPQKPQPTPPVL 769
            ...|||.|.||.|              .|..:...:.|.   .||:.|....|.|........:.
  Fly   359 ARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSPPVPHSLAAKIS 423

  Fly   770 MQGEDTKE---LLVSTN----IRFPAQGEESLEPPSSAVMQGPP-------AGP----NINGHAQ 816
            .....:|.   |..|:|    :...|||..:.....|....|||       |.|    :.|||..
  Fly   424 SSASGSKNCNLLSASSNSCHKLNAHAQGSGAGSGSGSGSGSGPPGHSHYAAASPKSSVSSNGHLN 488

  Fly   817 PLSLQQIQNSNPVVFPKPMDEVVPGSASVQIQQHEVLNLSQQKQPLKFPAQQPGEQPSLEMEPPP 881
            ...|..: ......|.:.:      ||......|...|.|||:...:   ...|.:|..|     
  Fly   489 KYCLTDL-TRRKAEFNRQL------SAPTDYTHHSSSNGSQQEGSSE---ANEGHEPVGE----- 538

  Fly   882 RYPTTVPVAHAPPTPGKRPLGTS--PPSNFYNEYNRKPQNGPRPSNLPNILPQFRPNAKISSGHP 944
               :|:.||.|         |.|  .|.::...|.....:...|:||...|...    ...|.||
  Fly   539 ---STITVASA---------GVSYPHPYSYPYHYAHHASSATAPANLKASLQLH----SFGSHHP 587

  Fly   945 PALKQEPGNIRLPQQGGPGPKRPYNPAMQPQFAHRRQPLHQ 985
                            .|.|.||.:.:....|..|....|:
  Fly   588 ----------------CPYPARPTSTSCTNSFNRRHIRRHK 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 40/195 (21%)
IhNP_001033948.1 Ion_trans_N 709..751 CDD:400630
PLN03192 741..>1214 CDD:215625
Blue background indicates that the domain is not in the aligned region.

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