DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Kcnh3

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_058804.1 Gene:Kcnh3 / 27150 RGDID:71070 Length:1087 Species:Rattus norvegicus


Alignment Length:446 Identity:95/446 - (21%)
Similarity:133/446 - (29%) Gaps:128/446 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 SFVLG-----SQVQQVSVGHPSIEKEPLFAKDTPGVQYGQVINEDIGNIKRPLKEPLPPPPNFQQ 686
            |:.||     ::|...|:...:.....|..|:|.|.| |..|:      ..|..||..|      
  Rat   704 SYNLGAGGVSAEVDTSSLSGDNTLMSTLEEKETDGEQ-GHTIS------PAPADEPSSP------ 755

  Fly   687 MPSIQQNSNFHQNGNVATSGAPGTISYQEPPPEAPTPYQQLPLIGSNKRPSKKPVTKPEQPSHSY 751
                     ....|..::|.|...:|.:...|.        |.:|...|||:..|.|||....::
  Rat   756 ---------LLSPGCTSSSSAAKLLSPRRTAPR--------PRLGGRGRPSRAGVLKPEAGPSAH 803

  Fly   752 PPQQSSTPQKPQP--TPPVLMQ----------GEDTKELLVSTNIRFPAQGEESLEPPSSAVMQG 804
            |.........|.|  .||.|..          |.|..:.    :.|....|.|....||.....|
  Rat   804 PRTLDGLQLPPMPWNVPPDLSPRVVDGIEDGCGSDQHKF----SFRVGQSGPECSSSPSPGTESG 864

  Fly   805 PPAGPNINGHAQPLSLQQIQNSNPVVFPKPMDEVVPGSASVQIQQHEVLNLSQQKQPLKFPAQQP 869
            ....|.:...|:          |.....|....|...|..| :|..|.|...:|...|....|..
  Rat   865 LLTVPLVPSEAR----------NTDTLDKLRQAVTELSEQV-LQMREGLQSLRQAVQLILVPQGE 918

  Fly   870 GEQPSLEMEPPPRYPTTVPVAHAP-------------PTPGKRPLGTSPPSNFYNEYNRKPQNGP 921
            |:.|.:..|.|  .|.|......|             |..|....||.|              .|
  Rat   919 GQCPRVSGEGP--CPATASGLLQPLRVDTGASSYCLQPPAGSVLSGTWP--------------HP 967

  Fly   922 RPSNLPNILP--QFRPNAKISSGHPPAL--------KQEPGNIRLPQQGGPGPKRPYNPAMQPQF 976
            ||.:.|.::.  .:.|.|..||..|.|.        .:.||:..|..:    |..|.:|....:.
  Rat   968 RPGHPPPLMAPWPWGPPASQSSPWPRATALWTSTSDSEPPGSGDLCSE----PSTPASPPPPEEG 1028

  Fly   977 AHRRQPLHQQHQQMMQKRYPMNRISEYPVGPGPGGDVNRRVYRLPPYGGQNVPYMP 1032
            |....|.            |:::......|..|.|.           ||:.:|:.|
  Rat  1029 ARTGTPA------------PVSQAEATSTGEPPPGS-----------GGRALPWDP 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 45/205 (22%)
Kcnh3NP_058804.1 PAS_9 40..135 CDD:463873
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..161
PLN03192 227..>654 CDD:215625
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..436
Selectivity filter. /evidence=ECO:0000250 468..473
cyc_nuc_ocin <609..704 CDD:274839 95/446 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 733..813 25/109 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 975..1061 21/112 (19%)
Blue background indicates that the domain is not in the aligned region.

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