DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6026 and Kcnh8

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_659563.1 Gene:Kcnh8 / 246325 RGDID:2549 Length:1102 Species:Rattus norvegicus


Alignment Length:641 Identity:113/641 - (17%)
Similarity:192/641 - (29%) Gaps:214/641 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLALMLLLSTAATSSGESTTETPSALLPLEARSADVSGEEDVISTSYVLPNQIFNEGKPYYARQD 74
            |.:|.|.:.|:..:.||.......|   |:|.....||..:|:..|.||  .|..:|       |
  Rat   560 LRSLSLHIKTSFCAPGEYLLRQGDA---LQAIYFVCSGSMEVLKDSMVL--AILGKG-------D 612

  Fly    75 PVSGQLDFSAKKPAGIQPEANEVLDPN-----------EKIVLSGGSSPNIHDFLNLPVKYSSSK 128
            .:...|...           ::|:..|           :.|:|.|     :.:.|.|..:| :.|
  Rat   613 LIGANLSIK-----------DQVIKTNADVKALTYCDLQCIILKG-----LFEVLGLYPEY-AHK 660

  Fly   129 FVYPLVSSSYANLKYQGSNKNYITNKKPTSVVAPVTPP---------PPNYHSSNFFTVPTTKLT 184
            ||..:......||: :|...:.|:.....|.|....|.         |..........|...:.|
  Rat   661 FVEDIQHDLTYNLR-EGHESDVISRLSNKSTVPQAEPKGNGSIKKRLPSIVEDEEEEEVEEEETT 724

  Fly   185 AVTPTAGAYYPSSPSTSTSTTTSTSTT---TTTTTTTRGTLPPSRKPVTTTTTTAPTSPAAKYTT 246
            :::|    .|....|.|.|..|.:|.:   .:....|.||: |...|:..::..:|.:       
  Rat   725 SLSP----IYTRGSSVSHSKKTGSSKSYLGLSLKQLTSGTV-PFHSPIRVSSANSPKT------- 777

  Fly   247 TSRRPIPLQTVSTTPQPPRTSTTRKKFVPTKKYSPTVPSTSGRPTVGHEDQRPVKSSPRPTPSSS 311
                       .....||...|.::|.:..:..|   ..|:|.|.:          |||......
  Rat   778 -----------KQEADPPNHGTRKEKNLKVQLCS---LGTAGTPEL----------SPRIVDGIE 818

  Fly   312 DVALTTHHATPQAAIFPTEPVTTTKMYTTSSTSAPVVFTEGPTPPPAFSPIPGTGIPNLDPADVY 376
            |   .......|...|.:|.:                     .|.|..||               
  Rat   819 D---GNSSEETQTFDFGSEQI---------------------RPEPRISP--------------- 844

  Fly   377 HTLGQKNTQA--------EEQQQLQLEKQQQMQKQQQIQHQQYQEQQQQQLYEQQQYQLQLEKQH 433
             :||:....|        |.:||:.....:.....|::          .||.:..:..:||.:..
  Rat   845 -SLGESEIGAAFLFIKAEETKQQINKLNSEVTTLTQEV----------SQLGKDMRSIMQLLENI 898

  Fly   434 LDKQK-------HPYQQQLEKQQQQQQQQQQQHHQQQHQQQH----------------------- 468
            |..|:       ||......::..|.:.....|....|.|.:                       
  Rat   899 LSPQQPSQFCSLHPTSICPSRESFQTRVSWSAHQPCLHLQANGAHLYHGNVTSDIWSVDPSLVGS 963

  Fly   469 QQQQHQQHQQQHIQQQHQHQQQHQPLPPTLQQQPS----------------PPKPPMTLSDIFNS 517
            ..|:.:.|:|..:..:..|.       |.|...||                .|....||:.:.:.
  Rat   964 NPQRTEAHEQSPVDSELHHS-------PNLAYSPSHCQVIQEGHLQFLRCISPHSDTTLTPLQSI 1021

  Fly   518 LAEEESNVAQNYQQNQGFDAQGNLIQP-------IAPSKPSPFAMQQ-PGTQQQPG 565
            .|...|:|..:.:.:.      :|:.|       |.....|.|:::. ||:..:.|
  Rat  1022 SATLSSSVCSSSETSL------HLVLPSRSEEGSITHGPVSSFSLENLPGSWDREG 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Kcnh8NP_659563.1 PAS_9 40..135 CDD:463873
PLN03192 175..>615 CDD:215625 18/66 (27%)
Selectivity filter. /evidence=ECO:0000250 434..439
cNMP-binding domain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00060 551..668 30/136 (22%)
PRK11753 578..>656 CDD:236969 20/105 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 683..744 12/64 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..793 6/48 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..845 8/66 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..983 3/22 (14%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.