DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6026 and Kcnh8

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:XP_036016335.1 Gene:Kcnh8 / 211468 MGIID:2445160 Length:1103 Species:Mus musculus


Alignment Length:445 Identity:83/445 - (18%)
Similarity:134/445 - (30%) Gaps:143/445 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1199 LKNKKPQSLQQQNKAQHVPKDKFPYPIEKPDPSFSELHPESQTSVSGVLVAPRIITGAMGTGT-- 1261
            |.||...| |.:.|.......:.|..:|  |....|:..|..||:|.:......::.:..||:  
Mouse   686 LSNKSTVS-QAEPKGNGSINKRLPSIVE--DEEEEEVEEEETTSLSPIYTRGSSVSHSKKTGSNK 747

  Fly  1262 -----------------ETPIAIA-----YTPTEPNPFRHEQGQKFSNI-------------NLA 1291
                             .:||.::     .|..|.:|..|.: :|..|:             .|:
Mouse   748 TYLGLSLKQLASGTVPFHSPIRVSSANSPKTKQEADPPNHGR-KKEKNLKVQLSSLGSAGTPELS 811

  Fly  1292 TSVINEIRQDTQTEEGLSSDFDLRGQNFEKDFMAPFYPSVSLGGASGAAAINPAAPSNWNILPST 1356
            ..:::.|......||..:.||                         |:..|.|..    .|.|..
Mouse   812 PRIVDGIEDGNSNEETQTFDF-------------------------GSEQIRPEP----RISPPL 847

  Fly  1357 TDQAI----------YEKNNINRADVETTEQKKPEEE---------QPTASALTAEKPSEMDSFQ 1402
            .:..|          ..|..||:.:.|.|...:...:         |...:.|:.::||:..|..
Mouse   848 AESEIGAAFLFIKAEETKQQINKLNSEVTTLTQEVSQLGRDMRSIMQLLENILSPQQPSQFCSLH 912

  Fly  1403 PQLQGGFKPIYPPGYKHVEQVEQEEIAGAKNAGKDQPIALPLM--------GTTAKPSTSASP-- 1457
            |      .|:.|         .:|.:....:....|| .|.|.        |..|....|..|  
Mouse   913 P------TPMCP---------SRESLQTRVSWSAHQP-CLHLQAGGAHLYHGNVASGIWSVDPSL 961

  Fly  1458 VSSSSSSSTSTSSTTSTTSTTHPPGV----------------------TKSDVTLATTKAPAIST 1500
            |.||...:.:.....:.:...|.|.:                      ..||.||  |...:||.
Mouse   962 VGSSPQRTEAHEQNPADSELHHSPNLDYSPSHCQVIQEGHLQFLRCISPHSDTTL--TPLQSISA 1024

  Fly  1501 KPTQRKKSTFETSLAALLFGDEDEEDGARKSAELPKAQVGPRNVPRMGPRSLTLS 1555
            ..:....|:.||||..:|  ....|:|:....  |.:.....|:|....|...:|
Mouse  1025 TLSSSVCSSSETSLHLVL--PSRSEEGSITHG--PVSSFSLENLPGSWDREQMMS 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Kcnh8XP_036016335.1 PAS_9 40..135 CDD:463873
PLN03192 175..>616 CDD:215625
PRK11753 579..>657 CDD:236969
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.