DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Hcn3

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_032253.1 Gene:Hcn3 / 15168 MGIID:1298211 Length:779 Species:Mus musculus


Alignment Length:298 Identity:69/298 - (23%)
Similarity:106/298 - (35%) Gaps:96/298 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   820 LQQIQNSNPVVFPKPMDEVVPGSASVQIQQHEVLNLSQQKQPLKFPAQQPGEQPSLEMEPPPRYP 884
            |::|...|.:: .:...|..|||:...::||.|.:.....:.::..|  ||....|..:|    .
Mouse   543 LRRIGKKNSIL-QRKRSEPSPGSSGGVMEQHLVQHDRDMARGVRGLA--PGTGARLSGKP----V 600

  Fly   885 TTVPVAHAP-------------PTPGKRPLGTSPPSNFYNEYNRKPQNGPRPSNLPNILPQFRPN 936
            ...|:.|||             .|..:.||..||.|               |:.|      ...:
Mouse   601 LWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDS---------------PATL------LARS 644

  Fly   937 AKISSGHPPALKQEPGNIRLPQQGGP----GP-----KRPYNPAMQPQFAHRRQPLHQQHQQMMQ 992
            |:.|:|       .|.:..:|.:.||    ||     :.|..||         :.||....:..:
Mouse   645 ARRSAG-------SPASPLVPVRAGPLLARGPWASTSRLPAPPA---------RTLHASLSRTGR 693

  Fly   993 KRYPMNRISEYPVGPGPGGDVNRRVYRLPPYGGQNVPYMPDHMYPRRPQGAG-PLRSVDGYPAER 1056
            .:..:       :||.|||...    ||.|.|.......|.  .|:|..|.| |.|...|  :||
Mouse   694 SQVSL-------LGPPPGGGAR----RLGPRGRPLSASQPS--LPQRATGDGSPRRKGSG--SER 743

  Fly  1057 HAPS---SEPYKTIDAEAAADFEEEDLVINDPPQPVTP 1091
            ..||   ::|..|:....::           .|:||||
Mouse   744 LPPSGLLAKPPGTVQPPRSS-----------VPEPVTP 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065 39/176 (22%)
Hcn3NP_032253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
Involved in subunit assembly. /evidence=ECO:0000250 45..90
Ion_trans_N 48..90 CDD:400630
Ion_trans 92..357 CDD:459842
Interaction with KCTD3. /evidence=ECO:0000269|PubMed:23382386 353..779 69/298 (23%)
CAP_ED 427..535 CDD:237999
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..569 5/20 (25%)
PHA03247 <585..773 CDD:223021 59/255 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..779 28/110 (25%)
Blue background indicates that the domain is not in the aligned region.

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