DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6026 and Hcn1

DIOPT Version :10

Sequence 1:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_034538.2 Gene:Hcn1 / 15165 MGIID:1096392 Length:910 Species:Mus musculus


Alignment Length:604 Identity:128/604 - (21%)
Similarity:192/604 - (31%) Gaps:229/604 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ALLPLEARSADVSGEEDVISTSYVLPNQIFNEGKPYYARQDPVSGQLDFSAKKPAGIQPEANEVL 98
            |.:||.| :||.:....::|.   |..::|..| .|..|:..|..::.|.....||:      :.
Mouse   460 ATMPLFA-NADPNFVTAMLSK---LRFEVFQPG-DYIIREGAVGKKMYFIQHGVAGV------IT 513

  Fly    99 DPNEKIVLSGGS--------------------------SPNIHDFLNLPVKYSSSKFVYPLVS-- 135
            ..::::.|:.||                          |.::.:|..:..:|...:..:..|:  
Mouse   514 KSSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 578

  Fly   136 --------SSYANLKYQGSNKNYITNKKPTSVVAPVTP---------PPPNYHSSNFFTVPTTKL 183
                    :|....|:|......:.|.:...::..:..         ||.||          .::
Mouse   579 RLDRIGKKNSILLQKFQKDLNTGVFNNQENEILKQIVKHDREMVQAIPPINY----------PQM 633

  Fly   184 TAVTPTAGAYYPSSPSTSTSTTTSTSTTTTTTTTTRGTLPPSRKPVTTTTTTAPTSPAAKYTTTS 248
            ||:                   ..||:|||.|:..|...||                  .||.||
Mouse   634 TAL-------------------NCTSSTTTPTSRMRTQSPP------------------VYTATS 661

  Fly   249 RRPIPLQTVSTTPQPPRTSTTRKKFVPTKKYSPTVPSTSGRPTVGHEDQRPVKSSPRPTPSSSDV 313
            .....|.:.|.:.|.|:         |:...||...:|:            |.|.|..:|.::  
Mouse   662 LSHSNLHSPSPSTQTPQ---------PSAILSPCSYTTA------------VCSPPIQSPLAT-- 703

  Fly   314 ALTTHHATPQAAIFPTEPVTTTKMYTTSSTSAPVVFTEGPTPPPAFSPIPGTGIPNLDPADVYHT 378
             .|.|:|:|.|:                                                     
Mouse   704 -RTFHYASPTAS----------------------------------------------------- 714

  Fly   379 LGQKNTQAEEQQQLQLEKQQQMQ-KQQQIQHQQYQEQQQQQLYEQQQYQLQLEKQHLDKQKHPYQ 442
                        ||.|.:|.|.| .|.|:|..|.|.|||||                       |
Mouse   715 ------------QLSLMQQPQQQLPQSQVQQTQTQTQQQQQ-----------------------Q 744

  Fly   443 QQLEKQQQQQQQQQQQHHQQQHQQQHQQQQHQQ-------HQQQHIQQQHQHQQQ-HQPLPPTLQ 499
            ||.::|||||||||||..|||.|||.||||..|       ..:.|...|..|... .:.:.|...
Mouse   745 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQTPGSSTPKNEVHKSTQALHNTNLTKEVRPLSA 809

  Fly   500 QQPSPPKPPMTL-----SDIFNSLAEEESNVAQNYQQNQGFDAQGNLIQPIAPSKPSPFAMQQPG 559
            .|||.|....||     ..:..|||.....||..:.......::..:.|.:...:........|.
Mouse   810 SQPSLPHEVSTLISRPHPTVGESLASIPQPVAAVHSTGLQAGSRSTVPQRVTLFRQMSSGAIPPN 874

  Fly   560 TQQQPGTQQPAPHQRPSPN 578
            ....|....||..||.||:
Mouse   875 RGVPPAPPPPAAVQRESPS 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Hcn1NP_034538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75
Ion_trans_N 87..129 CDD:400630
PLN03192 122..>609 CDD:215625 27/159 (17%)
Selectivity filter. /evidence=ECO:0000305|PubMed:12089064 347..351
CAP_ED 464..572 CDD:237999 20/118 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..681 20/92 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 771..791 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 865..910 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.

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