DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp18 and AT1G54590

DIOPT Version :9

Sequence 1:NP_650776.1 Gene:Prp18 / 42285 FlyBaseID:FBgn0027784 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_175861.2 Gene:AT1G54590 / 841901 AraportID:AT1G54590 Length:361 Species:Arabidopsis thaliana


Alignment Length:320 Identity:101/320 - (31%)
Similarity:158/320 - (49%) Gaps:42/320 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KKKYFRRGDLNAKNTEEV-LQKVGYIKQESVEAQGQTTEGAYSFVADGQNILPRTEVIRRLRERG 87
            |.:.||.|.|:.|:.... .|:|.: ::::...:|:.:...||::    :.:.|.:.::.:.:.|
plant    38 KTRDFRFGQLSRKDGNNFKSQRVTH-RRDTQPNRGRGSNLTYSWM----SFIVRLDRLKYVLKEG 97

  Fly    88 EPILIFGE-----TEPEAFDRLRQ-CEISQPEANRGFRNDFQEAMEQVDAAYLQEMFANTPTTKE 146
                :|.|     |:.|..|.||. .|:.:.|.:.|..||.:......|.....|        ||
plant    98 ----LFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSNDDELIGAE--------KE 150

  Fly   147 DKKSDFAELDESVSWESIQTMAANMGRNKDYDMDVIITLLTFLLKLWNDQIANYSKHEKMSTKVK 211
            |.|     |.|..::|.:            .|.|.|:.....||..|..::......|:.:...|
plant   151 DLK-----LLEEANFEDL------------CDEDKILVFCKKLLLEWKQELEAMENTERRTAIGK 198

  Fly   212 MTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLLNRNYITASDAYLEMAIGNAPWPIG 276
            .....:.|...|:.|||...::..||.||...|..:....:.|:|:.|:..::::||||||||||
plant   199 QMLATFNQCARYLTPLFHLCRNKCLPADIRQGLMVMVNCWIKRDYLDATAQFIKLAIGNAPWPIG 263

  Fly   277 VTMVGIHARTGREKI-FSKNVAHVMNDETQRKYIQGLKRLMTKCQEYFPTDPSKCVEYVS 335
            |||||||.|:.|||| .|.:|||:||:||.|||:|.:|||||.||..:...|||.:|:.|
plant   264 VTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFCQRRYSALPSKSIEFNS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp18NP_650776.1 SFM 74..117 CDD:128776 11/48 (23%)
Prp18 186..322 CDD:280929 59/136 (43%)
AT1G54590NP_175861.2 Prp18 172..310 CDD:280929 59/137 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1569
eggNOG 1 0.900 - - E1_KOG2808
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 185 1.000 Inparanoid score I1414
OMA 1 1.010 - - QHG54709
OrthoDB 1 1.010 - - D1485522at2759
OrthoFinder 1 1.000 - - FOG0004368
OrthoInspector 1 1.000 - - otm3420
orthoMCL 1 0.900 - - OOG6_102077
Panther 1 1.100 - - O PTHR13007
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3091
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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