DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp18 and prp18

DIOPT Version :9

Sequence 1:NP_650776.1 Gene:Prp18 / 42285 FlyBaseID:FBgn0027784 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_588457.1 Gene:prp18 / 2539357 PomBaseID:SPCC126.14 Length:343 Species:Schizosaccharomyces pombe


Alignment Length:392 Identity:100/392 - (25%)
Similarity:170/392 - (43%) Gaps:110/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDILKAEIARKRKLLEQRQLVDEKKKYFRRGDLNAKNTEEVLQ-----------KVGYIKQE--- 51
            ||.||.||.|||:.||....:..||. |||||...:..::.||           |...:::|   
pombe     1 MDFLKEEIERKRRQLEGTSELPVKKA-FRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLK 64

  Fly    52 -------------------------------SVEAQGQTTEGAYSFVADGQNI---------LPR 76
                                           :|:|...:|:.:   |::...:         |..
pombe    65 YEEKKLRISRLANKESSRNEELLTETTTPSPAVKASPASTKLS---VSENDRLSIPEITKDNLTL 126

  Fly    77 TEVIRRLRERGEPILIFGETEPEAFDR----LRQCEISQPEANRGFRND-FQEAMEQVDAAYLQE 136
            ||:|.:|||..|||.:|||:|.....|    |:..::.:.|      |: ..:.:|.:|      
pombe   127 TEIIAKLREMKEPIRLFGESEEATIQRYYSLLKYKKLEEIE------NELLTKGVETID------ 179

  Fly   137 MFANTPTTKEDKKSDFAELDESVSWESIQTMAANMGRNKDYDMDVIITLLTFLLKLWNDQIANYS 201
             |.:..|||           ..||.:                   ::..|...:::|::.:::.|
pombe   180 -FEHATTTK-----------PKVSKQ-------------------VVAFLQHGIRIWDNFLSSKS 213

  Fly   202 KHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLLNRNYITASDAYLEM 266
            .:...|::.:|...|:.|.|:.:..|.:.:....|.:||..|:.:||.......::.|:|.||.:
pombe   214 INSFESSESQMQLKIFRQAKQDLDVLIQLIVDEALNDDIFKSIAEICYRCQKHEFVKANDMYLRL 278

  Fly   267 AIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQGLKRLMTKCQEYFPTDPSKCV 331
            .||||||||||||||||.|:..:::.:...::::.||.:||.:|.|||.:|    :...:.|...
pombe   279 TIGNAPWPIGVTMVGIHERSAHQRLQANPSSNILKDEKKRKCLQALKRFIT----FQERESSNLP 339

  Fly   332 EY 333
            ||
pombe   340 EY 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp18NP_650776.1 SFM 74..117 CDD:128776 17/46 (37%)
Prp18 186..322 CDD:280929 45/135 (33%)
prp18NP_588457.1 SFM 124..162 CDD:128776 16/37 (43%)
Prp18 197..333 CDD:280929 45/139 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I1898
eggNOG 1 0.900 - - E1_KOG2808
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I1554
OMA 1 1.010 - - QHG54709
OrthoFinder 1 1.000 - - FOG0004368
OrthoInspector 1 1.000 - - oto101455
orthoMCL 1 0.900 - - OOG6_102077
Panther 1 1.100 - - LDO PTHR13007
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R988
SonicParanoid 1 1.000 - - X3091
TreeFam 1 0.960 - -
1312.860

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