DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatA and AT5G07360

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001331984.1 Gene:AT5G07360 / 830627 AraportID:AT5G07360 Length:659 Species:Arabidopsis thaliana


Alignment Length:463 Identity:118/463 - (25%)
Similarity:197/463 - (42%) Gaps:97/463 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIKQLTASYSDGQLSPRRVTEDALQDALRWK-TLNAFVRLTPEQAGQQAQDAEQRYKLRQPISDL 71
            |:.:|.......|::.:.:....|:...|:. .|.|.|..|.|.|.:||::|:........:..|
plant   204 SVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDLLSQGTYLGPL 268

  Fly    72 DGVTIAIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDS 136
            .|:...:||........||..|...:|.....:|.|..|||.:|||::.|     ...|:...|.
plant   269 HGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAK-----LVTGSMAYDD 328

  Fly   137 LY--GPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKP 199
            ::  |.|:|.|:.:      ..:.|||.|.|::.:||:...||||:|.||...||:.||:..|:|
plant   329 IWFGGRTRNPWNIE------EFSTGSSAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRP 387

  Fly   200 TYGLVSRHGLIPLVNSMDVPGIFARSVSDCVAVLNTVAG--PDKLDSTTI--RQPFTRLHLPEVG 260
            |:|.|.|.|::.:..|:|..|.|.|:.:||..:|:.:.|  ||.|.|..|  ..||:        
plant   388 TFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPDDLSSREIAFEDPFS-------- 444

  Fly   261 QIDLSTVRIGIPKEYHCHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEV 325
             :|::.:.:|..|:       |::     ||.::|...|.::....|..|..|  |..|||....
plant   445 -VDITKLTVGYTKD-------ADM-----KVVEVLGSKGVNMVPFELNYTVES--VQGILNFTMD 494

  Fly   326 ASNMARYD-----GIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEK 385
            ...:|.:|     |.|..:.|.|:...|    |.||         |::|.        .|:.  :
plant   495 VDMLAHFDEWQRTGQEDLYEAQDQWPVE----LRRA---------RVVTA--------VDYI--Q 536

  Fly   386 ALRVRRLIAEDFARVFDSSAKEERVDILLTPTTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMA 450
            |.|.|..:..:..:.|       .||..:              .::|:.::..:       .|:.
plant   537 AQRARGKLIREVEKSF-------TVDAFI--------------GNVTDWEKVCM-------GNLV 573

  Fly   451 GIPAVSIP 458
            |:|.:.||
plant   574 GLPVLVIP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 118/463 (25%)
gatA 18..490 CDD:234572 116/453 (26%)
AT5G07360NP_001331984.1 GatA 199..634 CDD:223232 118/463 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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