DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatA and faah2b

DIOPT Version :10

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001070930.1 Gene:faah2b / 768298 ZFINID:ZDB-GENE-061027-358 Length:526 Species:Danio rerio


Alignment Length:536 Identity:135/536 - (25%)
Similarity:213/536 - (39%) Gaps:117/536 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQWSIKQLTASYSDGQLSPRRVTE---DALQDALRWKTLNAFVRLTPEQAGQQAQDAEQRYK--- 63
            |..|..||......|::|...|.:   |.:|:..  ..|||.::.....|..:|..|::..|   
Zfish    46 LTLSAVQLAEKIRRGEVSSVEVVQAYIDRIQEVN--PLLNALIKDRFSAALLEAARADKLIKEEN 108

  Fly    64 -----LRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTN 123
                 ||... .|.||.:::|::|..:.:..:...:.....:...||...:.||:|||:.||.||
Zfish   109 GGEEVLRNQF-PLLGVPMSVKESFGLQGMPNSGGLKSRGKVLASVDAPPVALLKRAGAIPLGVTN 172

  Fly   124 MDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNP 188
            ..:..|...:.:.|||.|.|.::.:      ||.||||||..|.:..|.....||||.|||.|.|
Zfish   173 TSELCMWMESNNHLYGITSNPYNLE------RICGGSSGGEGSIIGGGASVFGIGSDIGGSIRMP 231

  Fly   189 ASYCGVVGLKPTYGLVSRHGLIP----LVNSMDVPGIFARSVSDCVAVLNTVAGP--DKLDSTTI 247
            ..:.|:.|.||:.|:||.....|    |.|.....|...|...|.:.:|..:|||  |||   |:
Zfish   232 CFFNGIFGHKPSRGVVSNDNQFPRCSGLQNEYTGSGPMCRYAEDLLPLLKIMAGPTADKL---TL 293

  Fly   248 RQPFTRLHLPEVGQIDLSTVRI-------GIPKEYHCHGLSAEVLETWSKVADLLECS-GASVRQ 304
            .:           .:||..:|.       |.|.   ...:..:::|...:||..||.. |.:|::
Zfish   294 SK-----------AVDLKKLRFFTIVDDGGSPL---TSPVDRQLVEVQKRVAARLEADLGVTVQE 344

  Fly   305 VSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFN-----DVVK 364
            |:.|....|..::...        :|..|        .|.:..|....| .|:|.:     :::|
Zfish   345 VNFPQLKYSYQIWDTF--------LALPD--------KDGKPPEAFVEL-MADGGSVWPVWELIK 392

  Fly   365 --------TRILTGNFLLLKKNYDHYFEKALRVRRLIAEDFARVFDSSAKEERVDILLTPTTLT- 420
                    |....|..|:...:.....|..|:.:    ||..|        |..|:|.|...|. 
Zfish   393 RIFGRSEHTVAAIGLALMESSHSSKSSEFILKQK----EDLQR--------EMEDLLGTDGVLLY 445

  Fly   421 ----------EAPLYKDFASLTNRDQCAVQDFC-TQPANMAGIPAVSIPIRLSQAGLPLSLQLMS 474
                      ..||:..|            :|. |...|:.|:|....|:.||:..|||.:|:::
Zfish   446 PSHPLLAPKHHHPLFMPF------------NFSYTGILNILGLPVTQCPLGLSKERLPLGVQVVA 498

  Fly   475 NSLNEQLLLTVARWIE 490
            ....:.|.|.:|.::|
Zfish   499 GLCQDHLTLAMALYLE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 GatA 1..491 CDD:439924 135/536 (25%)
faah2bNP_001070930.1 GatA 45..518 CDD:439924 135/536 (25%)

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