DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and faah.2

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001011356.1 Gene:faah.2 / 496823 XenbaseID:XB-GENE-997947 Length:582 Species:Xenopus tropicalis


Alignment Length:561 Identity:132/561 - (23%)
Similarity:206/561 - (36%) Gaps:137/561 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQWSIKQLTASYSDGQLSPRRVTEDALQDALR-WKTLNAFVRLTPEQAGQQAQDAEQRYKLRQPI 68
            |..|:.:|.:...||.|||..|....::.||. ...||......||...|......|:.|     
 Frog    73 LSLSLPELASKLKDGSLSPEMVLHSYMRKALDVTSELNCVTDYLPECETQLVHLRGQKTK----- 132

  Fly    69 SDLDGVTIAIKDNFCTKDVHTTCASRMLQDFVPP--YDATVCSRLKQAGAVILGKTNMDQFAMGA 131
            ..|.||.|::||||......:|..  :|.....|  .|:.:...||..||:...|||:.|..:..
 Frog   133 GLLYGVPISLKDNFNYTGHDSTLG--LLNQLNRPACEDSVIAKVLKVQGALPFMKTNIPQSMLNY 195

  Fly   132 GTVDSLYGPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVG 196
            ...:.:||.|.|    .||  |.:..||||||..|.:|||.....||||.|||.|.|:::||:.|
 Frog   196 DCSNPIYGRTLN----PLN--HKKTPGGSSGGEGSLIAAGGSILGIGSDIGGSIRFPSAFCGICG 254

  Fly   197 LKPTYGLVSRHGL-IPLVNSMDVP---GIFARSVSDCVAVLNTVAGPD--KLDSTTIRQPFTRLH 255
            .|||...:|:.|: ........|.   |..||.|...|..:..:...:  :||.|....||..  
 Frog   255 FKPTANRLSKLGVKTSSAGQKSVAAMIGPLARDVDSLVLCMRALLCEEMFQLDPTIPPLPFNE-- 317

  Fly   256 LPEVGQIDLST--VRIGIPKEYHCHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYT 318
                 :|..||  :|||..:.......:..:.....:..:|||.:|..:...:.|:...|:|   
 Frog   318 -----EIYSSTRPLRIGYYETDDATMATPSMKRAVHETKELLERAGHKMVPFTPPSVEKSMF--- 374

  Fly   319 ILNQCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYF 383
                 |:.......||   |....|....:|:         :..:||::.|.......|.:..:.
 Frog   375 -----ELIVKGLLADG---GSTFLDNFKGDQV---------DPNLKTQVSTYGLPYWLKIFISFI 422

  Fly   384 EKAL--RVRRLI------------------AEDFARVFDSSAKEERVDILLTP------------ 416
            .|.:  |:.:|:                  .|.:.:.|.|..|:..:|.:|.|            
 Frog   423 VKPVFPRLSKLLQNIKGIRSVKDLWKHHLEVEAYRQEFISQWKKLEIDAVLCPILSPALTIGYPG 487

  Fly   417 ---TTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMAGIPAVSIPIR------------------ 460
               |.::...||                      |:...|...:|:.                  
 Frog   488 KLSTAVSYTILY----------------------NLVDFPVGVVPVTTVTKDDEEGLKAYKGHKK 530

  Fly   461 ------LSQA-----GLPLSLQLMSNSLNEQLLLTVARWIE 490
                  |.:|     |||:|:|.::....|:..|.:.:.:|
 Frog   531 DYWDKLLKEALTDSIGLPVSVQCVALPWQEEQCLRLMKEVE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 131/558 (23%)
gatA 18..490 CDD:234572 128/546 (23%)
faah.2NP_001011356.1 Amidase 94..564 CDD:366635 122/531 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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