DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and faah.2

DIOPT Version :10

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001011356.1 Gene:faah.2 / 496823 XenbaseID:XB-GENE-997947 Length:582 Species:Xenopus tropicalis


Alignment Length:561 Identity:132/561 - (23%)
Similarity:206/561 - (36%) Gaps:137/561 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQWSIKQLTASYSDGQLSPRRVTEDALQDALR-WKTLNAFVRLTPEQAGQQAQDAEQRYKLRQPI 68
            |..|:.:|.:...||.|||..|....::.||. ...||......||...|......|:.|     
 Frog    73 LSLSLPELASKLKDGSLSPEMVLHSYMRKALDVTSELNCVTDYLPECETQLVHLRGQKTK----- 132

  Fly    69 SDLDGVTIAIKDNFCTKDVHTTCASRMLQDFVPP--YDATVCSRLKQAGAVILGKTNMDQFAMGA 131
            ..|.||.|::||||......:|..  :|.....|  .|:.:...||..||:...|||:.|..:..
 Frog   133 GLLYGVPISLKDNFNYTGHDSTLG--LLNQLNRPACEDSVIAKVLKVQGALPFMKTNIPQSMLNY 195

  Fly   132 GTVDSLYGPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVG 196
            ...:.:||.|.|    .||  |.:..||||||..|.:|||.....||||.|||.|.|:::||:.|
 Frog   196 DCSNPIYGRTLN----PLN--HKKTPGGSSGGEGSLIAAGGSILGIGSDIGGSIRFPSAFCGICG 254

  Fly   197 LKPTYGLVSRHGL-IPLVNSMDVP---GIFARSVSDCVAVLNTVAGPD--KLDSTTIRQPFTRLH 255
            .|||...:|:.|: ........|.   |..||.|...|..:..:...:  :||.|....||..  
 Frog   255 FKPTANRLSKLGVKTSSAGQKSVAAMIGPLARDVDSLVLCMRALLCEEMFQLDPTIPPLPFNE-- 317

  Fly   256 LPEVGQIDLST--VRIGIPKEYHCHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYT 318
                 :|..||  :|||..:.......:..:.....:..:|||.:|..:...:.|:...|:|   
 Frog   318 -----EIYSSTRPLRIGYYETDDATMATPSMKRAVHETKELLERAGHKMVPFTPPSVEKSMF--- 374

  Fly   319 ILNQCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYF 383
                 |:.......||   |....|....:|:         :..:||::.|.......|.:..:.
 Frog   375 -----ELIVKGLLADG---GSTFLDNFKGDQV---------DPNLKTQVSTYGLPYWLKIFISFI 422

  Fly   384 EKAL--RVRRLI------------------AEDFARVFDSSAKEERVDILLTP------------ 416
            .|.:  |:.:|:                  .|.:.:.|.|..|:..:|.:|.|            
 Frog   423 VKPVFPRLSKLLQNIKGIRSVKDLWKHHLEVEAYRQEFISQWKKLEIDAVLCPILSPALTIGYPG 487

  Fly   417 ---TTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMAGIPAVSIPIR------------------ 460
               |.::...||                      |:...|...:|:.                  
 Frog   488 KLSTAVSYTILY----------------------NLVDFPVGVVPVTTVTKDDEEGLKAYKGHKK 530

  Fly   461 ------LSQA-----GLPLSLQLMSNSLNEQLLLTVARWIE 490
                  |.:|     |||:|:|.::....|:..|.:.:.:|
 Frog   531 DYWDKLLKEALTDSIGLPVSVQCVALPWQEEQCLRLMKEVE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 GatA 1..491 CDD:439924 132/561 (24%)
faah.2NP_001011356.1 Amidase 94..564 CDD:450241 122/531 (23%)

Return to query results.
Submit another query.