DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatA and faah2a

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001002700.1 Gene:faah2a / 436973 ZFINID:ZDB-GENE-040718-453 Length:532 Species:Danio rerio


Alignment Length:497 Identity:124/497 - (24%)
Similarity:199/497 - (40%) Gaps:109/497 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNAFVRLTPEQAGQQAQDAEQRYKL-------------RQPISDLDGVTIAIKDNFCTKDVHTTC 91
            :||.|:   ::.....|:|.|..||             |.|   |.||.|.:|:.|..:.:..:.
Zfish    83 INAMVK---DRFSAALQEAAQVDKLIEEETGGEDVLEDRLP---LLGVPITVKEAFALQGMPNST 141

  Fly    92 ASRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRI 156
            .....:|.|...||...:.||:|||:.||.||..:..|...:.:.|||.|.|.:      |..||
Zfish   142 GLLTRRDLVSGADAPSVALLKRAGAIPLGVTNCSELCMWLESHNHLYGITNNPY------DFERI 200

  Fly   157 AGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDV--- 218
            .||||||..|.:.||.....||||.|||.|.|..:.|:.|.||:.|:|:..|..|..:...:   
Zfish   201 VGGSSGGEGSILGAGSSVIGIGSDIGGSIRIPCFFNGIFGHKPSVGIVNNEGQYPPASGQQMGFL 265

  Fly   219 -PGIFARSVSDCVAVLNTVAGP--DKLDSTTIRQPFTRLHLPEVGQIDLSTVR-IGIPKEYHCHG 279
             .|...|...|.:.:|:.:.||  :||...|              ::||..:| ..:|.....|.
Zfish   266 CTGPMCRYAEDLIPMLSIMGGPNAEKLSLFT--------------EVDLKKLRFFSVPHNGGSHL 316

  Fly   280 LS---AEVLETWSKVADLLECS-GASVRQVSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHR 340
            :|   .::|.....|...||.. |..|:::.:|....|..::..:    :||  ...||      
Zfish   317 VSPVEPQLLHAQKMVVKRLEADLGVKVQELLIPQLKYSFQIWGTM----MAS--PGKDG------ 369

  Fly   341 ATDERSTEQLYALSRAEGFNDVVKTRILTGNFL----------------LLKKNYDHYFEKALRV 389
                 .....:|...:||...|.....|...||                |.:.::...|  .::.
Zfish   370 -----KPPTTFAELMSEGGKKVWPAWELFKWFLGFSSHTLAAIGLALVELFQSSHPSPF--IMQQ 427

  Fly   390 RRLIAEDFARVFDSSAKEERVDILLTPTTLTEA-----PLYKDFASLTNRDQCAVQDFC-TQPAN 448
            :..:.::...:..:..      :||.|:....|     |::..|            :|. |...|
Zfish   428 KESLQQELEELLGTDG------VLLYPSHPLIAQKHHHPIFTPF------------NFSYTGIFN 474

  Fly   449 MAGIPAVSIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIE 490
            :.|:|....|:.||..||||.:|:::..|.::|.|..|.::|
Zfish   475 ILGLPVTQCPLGLSAEGLPLGVQIVAGKLQDRLSLATALYLE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 124/497 (25%)
gatA 18..490 CDD:234572 123/495 (25%)
faah2aNP_001002700.1 PRK07488 46..526 CDD:236030 124/497 (25%)
Amidase 48..525 CDD:302749 124/497 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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