DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatA and CG7910

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001287222.1 Gene:CG7910 / 40956 FlyBaseID:FBgn0037547 Length:530 Species:Drosophila melanogaster


Alignment Length:498 Identity:118/498 - (23%)
Similarity:190/498 - (38%) Gaps:102/498 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TLNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLD-----------GVTIAIKDNFCTKDVHTTCA 92
            :|||.|....|.|.|.|:.|:|  .:.:..|:.|           ||...:|::...|.:.....
  Fly    77 SLNAVVEDRFEAALQDAKLADQ--FIEKASSEFDRVALYTKYPILGVPFTVKESCGLKGLSFAVG 139

  Fly    93 SRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIA 157
            |...::...|.|..|...::.||.:.|..:...:|.|...|.:::.|...|.:      |..|.:
  Fly   140 SLARKNMKAPQDGDVVELVRAAGGIPLLVSANPEFCMSFETSNNIQGRCLNPY------DLQRTS 198

  Fly   158 GGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPL------VNSM 216
            .|||||.||....|.....:|||..||.|.||.:|||.|.|||.||.|..|..|.      .:.|
  Fly   199 AGSSGGEASLNGCGATTFGVGSDISGSIRLPALFCGVFGHKPTGGLTSVKGHFPYSLTDKKFSEM 263

  Fly   217 DVPGIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLHLPEVGQIDLSTVRIGIPKEYHCHGLS 281
            ...|...|...|...:|..:|| ||.....:.:|                |.:...|.|:..|.|
  Fly   264 LQIGPITRFARDLPLLLEIMAG-DKKHKLKMSEP----------------VALKDMKVYYAFGYS 311

  Fly   282 A-----------EVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILNQCEVA-SNMARYDG 334
            .           ::....:|....||..|...:::.|.         .:.|..|:| .::....|
  Fly   312 GFNCLTHPVVDFDIKLAITKAVTCLERGGVQSKKLDLK---------FLRNSLEIALVSLVDLKG 367

  Fly   335 IEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTG-----------NFLLLKKNYDHYFEKALR 388
            :.  ...|.....:....|...|.||.::...|.|.           |.|:...|.:.|..:|.:
  Fly   368 LP--SIVTQRADRDPSMRLLMVELFNSIIGHSIFTKEAMVLEVMKRFNGLMATGNMEEYRVEAQK 430

  Fly   389 VR----RLIAEDFARVFDSSAKEERVDILLTPTTLTEA-PLYKDFASLTNRDQCAVQDFCTQPAN 448
            ::    :|:...              .:|:.||..|.| ..:....::|..|...:       .|
  Fly   431 IKSHLNQLLGTQ--------------GVLIMPTFHTSALCFHTSLLNVTGIDNLLL-------FN 474

  Fly   449 MAGIPAVSIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIEA 491
            :.|:||..:|:..:|.|:|:.||:::....::|.|.||..:||
  Fly   475 ILGLPATHVPMGTNQRGMPIGLQVVAAQYQDKLCLKVAAELEA 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 116/496 (23%)
gatA 18..490 CDD:234572 116/495 (23%)
CG7910NP_001287222.1 GatA 41..527 CDD:223232 118/498 (24%)
PRK07488 41..525 CDD:236030 118/498 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440859
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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