DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and CG8839

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_610764.1 Gene:CG8839 / 36340 FlyBaseID:FBgn0033717 Length:529 Species:Drosophila melanogaster


Alignment Length:522 Identity:127/522 - (24%)
Similarity:213/522 - (40%) Gaps:115/522 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRVTEDALQDALRWKTLNAFVRLTPE--------------QAGQQAQDAEQRYKLRQ-PISDLD- 72
            |::.:..|...   :.|.:|:|...|              ||.::|.:|:...|..| ...:|: 
  Fly    55 RKIRKQELSSV---QVLESFIRRIKEVNPILNCVVDERYDQALKEAAEADALIKSGQYSTEELEK 116

  Fly    73 -----GVTIAIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAG 132
                 ||.|..||....|.:..|......:|.....||...:.:::|||:.:..||:.:..|...
  Fly   117 EKPFLGVPITTKDCISVKGMLHTAGLFERRDVRAARDADAMALMRKAGAIPIALTNVSEVCMWWE 181

  Fly   133 TVDSLYGPTKNIWSEDLNKDHWRIAGGSSGG-----SASAVAAGLCYAAIGSDTGGSTRNPASYC 192
            :.::::|.|:|.:  |.|    ||.||||||     ||:|.|.||     |||.|||.|.||.:.
  Fly   182 SNNTVHGRTRNAY--DTN----RIVGGSSGGEGCIQSAAASAFGL-----GSDIGGSIRMPAFFN 235

  Fly   193 GVVGLKPTYGLVSRHGLIPL-----VNSMDVPGIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFT 252
            |:.|.||:..:||..|..|.     .||....|..:|...|...:|..:||          :...
  Fly   236 GIFGHKPSKLVVSNVGQFPAPFSAEQNSFLGLGPMSRFAEDLRPMLKIMAG----------EKAA 290

  Fly   253 RLHLPEVGQIDLSTVRIGIPKEYHCHG-----LSAEVLETWSKVADLL--ECSGASVRQVSLPNT 310
            .|:|.|  .:||:.::. ..:|....|     :..::.|..::||..|  :.....|.::.||:.
  Fly   291 LLNLDE--DVDLTKMKF-FYQESDGGGRLVSAVDPDLREAMNRVAQHLREKFGNQKVERIQLPHF 352

  Fly   311 AASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLL 375
            ..|..::        .:||....|..:.::..:.......| |...:.|....|...:..:..::
  Fly   353 RQSAAIW--------FANMRDDSGHGFAYQLGNLNHDINTY-LELFKWFFGASKHTFIGLSTAIM 408

  Fly   376 --------KKNYDHYFEKALRVRRLIAEDFARVFDSSAKEERVDILLTPTTLTEAPLYKDFASLT 432
                    ...|||    .:|.|..:.|:...:...:.      :|:.||..|.||.:       
  Fly   409 DSAQCKHGSPKYDH----LVRKRNELREELQSLLGDNG------VLIYPTHPTVAPYH------- 456

  Fly   433 NRDQCAVQDFCTQPANMA--------GIPAVSIPI-RLSQAGLPLSLQLMSNSLNEQLLLTVARW 488
                   .:..|:|.|.|        |.||.::|: :|...||||.:|:::|...::|.|.||..
  Fly   457 -------NEPITRPINFAYTGIVNVLGFPATAVPLGKLGSEGLPLGVQIIANFNQDRLCLAVAEE 514

  Fly   489 IE 490
            :|
  Fly   515 LE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 127/522 (24%)
gatA 18..490 CDD:234572 126/520 (24%)
CG8839NP_610764.1 GatA 42..525 CDD:223232 127/522 (24%)
PRK07488 49..520 CDD:236030 127/522 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440858
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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